Protein–RNA interactions for Protein: P13438

Tpbpa, Trophoblast-specific protein alpha, mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TpbpaP13438 Myo18a-208ENSMUST00000108375 7513 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
TpbpaP13438 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
TpbpaP13438 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC10.8□□□□□ -0.68
TpbpaP13438 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
TpbpaP13438 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
TpbpaP13438 Cacna1c-210ENSMUST00000187474 6911 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
TpbpaP13438 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
TpbpaP13438 Lactb2-201ENSMUST00000027071 4494 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
TpbpaP13438 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
TpbpaP13438 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
TpbpaP13438 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
TpbpaP13438 Megf11-203ENSMUST00000118485 3944 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
TpbpaP13438 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
TpbpaP13438 Tor1aip2-201ENSMUST00000060404 5135 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
TpbpaP13438 Atg16l2-201ENSMUST00000120267 6459 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
TpbpaP13438 Col4a6-201ENSMUST00000101205 6648 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
TpbpaP13438 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
TpbpaP13438 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
TpbpaP13438 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
TpbpaP13438 Pard3-213ENSMUST00000160766 4949 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
TpbpaP13438 Gm37513-201ENSMUST00000194830 2268 ntBASIC10.79□□□□□ -0.68
TpbpaP13438 Gm38378-201ENSMUST00000195153 2268 ntBASIC10.79□□□□□ -0.68
TpbpaP13438 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
TpbpaP13438 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
TpbpaP13438 Mcf2l-217ENSMUST00000145067 5313 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
TpbpaP13438 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
TpbpaP13438 Scn8a-201ENSMUST00000082209 11293 ntAPPRIS ALT1 TSL 5 BASIC10.79□□□□□ -0.68
TpbpaP13438 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC10.79□□□□□ -0.68
TpbpaP13438 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
TpbpaP13438 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
TpbpaP13438 Gm19972-201ENSMUST00000218180 5664 ntBASIC10.79□□□□□ -0.68
TpbpaP13438 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
TpbpaP13438 Tpp2-201ENSMUST00000087933 4649 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
TpbpaP13438 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
TpbpaP13438 Scrn1-201ENSMUST00000019268 4810 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
TpbpaP13438 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
TpbpaP13438 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
TpbpaP13438 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC10.79□□□□□ -0.68
TpbpaP13438 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
TpbpaP13438 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC10.79□□□□□ -0.68
TpbpaP13438 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
TpbpaP13438 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
TpbpaP13438 Gpr146-203ENSMUST00000100514 4264 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
TpbpaP13438 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC10.79□□□□□ -0.68
TpbpaP13438 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
TpbpaP13438 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
TpbpaP13438 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
TpbpaP13438 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
TpbpaP13438 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
TpbpaP13438 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC10.79□□□□□ -0.68
TpbpaP13438 Gm7809-201ENSMUST00000153199 742 ntBASIC10.79□□□□□ -0.68
TpbpaP13438 Gm16379-201ENSMUST00000161469 348 ntBASIC10.79□□□□□ -0.68
TpbpaP13438 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
TpbpaP13438 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC10.79□□□□□ -0.68
TpbpaP13438 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC10.79□□□□□ -0.68
TpbpaP13438 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
TpbpaP13438 Gm8762-201ENSMUST00000193486 339 ntBASIC10.79□□□□□ -0.68
TpbpaP13438 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC10.79□□□□□ -0.68
TpbpaP13438 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
TpbpaP13438 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC10.79□□□□□ -0.68
TpbpaP13438 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
TpbpaP13438 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
TpbpaP13438 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
TpbpaP13438 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
TpbpaP13438 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
TpbpaP13438 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
TpbpaP13438 Gm43267-201ENSMUST00000199664 1796 ntBASIC10.79□□□□□ -0.68
TpbpaP13438 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
TpbpaP13438 Epn3-202ENSMUST00000127305 3884 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
TpbpaP13438 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
TpbpaP13438 AC122197.2-201ENSMUST00000219196 1635 ntBASIC10.79□□□□□ -0.68
TpbpaP13438 Gria4-202ENSMUST00000063508 5352 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
TpbpaP13438 Gm43172-201ENSMUST00000202139 2137 ntBASIC10.79□□□□□ -0.68
TpbpaP13438 Slc9a8-202ENSMUST00000073873 4429 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
TpbpaP13438 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
TpbpaP13438 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
TpbpaP13438 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC10.79□□□□□ -0.68
TpbpaP13438 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
TpbpaP13438 Slc6a2-201ENSMUST00000072939 6187 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
TpbpaP13438 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
TpbpaP13438 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
TpbpaP13438 Clip1-202ENSMUST00000063905 4589 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
TpbpaP13438 Clasp2-201ENSMUST00000111838 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
TpbpaP13438 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
TpbpaP13438 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
TpbpaP13438 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
TpbpaP13438 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
TpbpaP13438 2610005L07Rik-202ENSMUST00000140111 4009 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
TpbpaP13438 Gm8131-201ENSMUST00000213783 1570 ntBASIC10.78□□□□□ -0.68
TpbpaP13438 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
TpbpaP13438 Kcns2-202ENSMUST00000228725 4906 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
TpbpaP13438 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
TpbpaP13438 Trpm2-203ENSMUST00000105401 7274 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
TpbpaP13438 Gm45428-201ENSMUST00000209619 1789 ntBASIC10.78□□□□□ -0.68
TpbpaP13438 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC10.78□□□□□ -0.68
TpbpaP13438 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
TpbpaP13438 Gm7537-201ENSMUST00000221660 1414 ntBASIC10.78□□□□□ -0.68
TpbpaP13438 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
TpbpaP13438 Pak7-201ENSMUST00000035264 4848 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
TpbpaP13438 Mgat5-201ENSMUST00000038361 8436 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms