Protein–RNA interactions for Protein: P01788

Ig heavy chain V region H8, mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01788 Gm37737-201ENSMUST00000195013 1638 ntBASIC9.4□□□□□ -0.9
P01788 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
P01788 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
P01788 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC9.4□□□□□ -0.9
P01788 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
P01788 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
P01788 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC9.4□□□□□ -0.9
P01788 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.91
P01788 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.91
P01788 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
P01788 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.91
P01788 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC9.4□□□□□ -0.91
P01788 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
P01788 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.91
P01788 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC9.4□□□□□ -0.91
P01788 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
P01788 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
P01788 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
P01788 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
P01788 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
P01788 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.91
P01788 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
P01788 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
P01788 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
P01788 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
P01788 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
P01788 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
P01788 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
P01788 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
P01788 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC9.39□□□□□ -0.91
P01788 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
P01788 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
P01788 Gm18986-201ENSMUST00000216029 1986 ntBASIC9.39□□□□□ -0.91
P01788 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC9.39□□□□□ -0.91
P01788 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC9.39□□□□□ -0.91
P01788 Gm2673-201ENSMUST00000120958 1608 ntBASIC9.39□□□□□ -0.91
P01788 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
P01788 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC9.39□□□□□ -0.91
P01788 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
P01788 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
P01788 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
P01788 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
P01788 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
P01788 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC9.39□□□□□ -0.91
P01788 Gm11658-201ENSMUST00000120913 1008 ntBASIC9.39□□□□□ -0.91
P01788 Gm14247-201ENSMUST00000120950 237 ntBASIC9.39□□□□□ -0.91
P01788 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
P01788 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
P01788 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC9.39□□□□□ -0.91
P01788 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC9.39□□□□□ -0.91
P01788 Gm24548-201ENSMUST00000158650 108 ntBASIC9.39□□□□□ -0.91
P01788 Gm16379-201ENSMUST00000161469 348 ntBASIC9.39□□□□□ -0.91
P01788 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
P01788 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
P01788 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC9.39□□□□□ -0.91
P01788 Gm5706-201ENSMUST00000181525 993 ntBASIC9.39□□□□□ -0.91
P01788 Gm2467-201ENSMUST00000182266 1010 ntBASIC9.39□□□□□ -0.91
P01788 Gm6981-201ENSMUST00000182467 1008 ntBASIC9.39□□□□□ -0.91
P01788 Gm28882-201ENSMUST00000185504 314 ntBASIC9.39□□□□□ -0.91
P01788 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC9.39□□□□□ -0.91
P01788 Gm8762-201ENSMUST00000193486 339 ntBASIC9.39□□□□□ -0.91
P01788 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
P01788 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
P01788 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
P01788 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
P01788 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
P01788 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC9.39□□□□□ -0.91
P01788 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
P01788 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
P01788 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
P01788 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC9.39□□□□□ -0.91
P01788 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
P01788 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
P01788 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
P01788 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
P01788 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
P01788 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC9.39□□□□□ -0.91
P01788 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
P01788 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC9.39□□□□□ -0.91
P01788 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
P01788 Gm18626-201ENSMUST00000221512 1409 ntBASIC9.39□□□□□ -0.91
P01788 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC9.39□□□□□ -0.91
P01788 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC9.39□□□□□ -0.91
P01788 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC9.39□□□□□ -0.91
P01788 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
P01788 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
P01788 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
P01788 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
P01788 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
P01788 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
P01788 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
P01788 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
P01788 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
P01788 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
P01788 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
P01788 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
P01788 Gm37014-201ENSMUST00000194723 2253 ntBASIC9.38□□□□□ -0.91
P01788 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
P01788 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
P01788 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms