Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Gm13045-201ENSMUST00000119019 712 ntBASIC12.9□□□□□ -0.34
Vti1aO89116 Gm6506-201ENSMUST00000119775 1136 ntBASIC12.9□□□□□ -0.34
Vti1aO89116 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Vti1aO89116 Gm29237-201ENSMUST00000186216 448 ntTSL 5 BASIC12.9□□□□□ -0.34
Vti1aO89116 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC12.9□□□□□ -0.34
Vti1aO89116 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
Vti1aO89116 Gm35960-201ENSMUST00000202712 767 ntBASIC12.9□□□□□ -0.34
Vti1aO89116 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Vti1aO89116 AC153954.1-201ENSMUST00000216959 255 ntBASIC12.9□□□□□ -0.34
Vti1aO89116 AC159103.1-201ENSMUST00000228325 429 ntBASIC12.9□□□□□ -0.34
Vti1aO89116 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vti1aO89116 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vti1aO89116 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Vti1aO89116 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Vti1aO89116 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vti1aO89116 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Vti1aO89116 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC12.9□□□□□ -0.34
Vti1aO89116 Gm44260-201ENSMUST00000204946 2094 ntBASIC12.9□□□□□ -0.34
Vti1aO89116 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vti1aO89116 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vti1aO89116 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Vti1aO89116 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Vti1aO89116 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.35
Vti1aO89116 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vti1aO89116 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vti1aO89116 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Vti1aO89116 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vti1aO89116 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vti1aO89116 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Vti1aO89116 Tardbp-210ENSMUST00000172073 6513 ntTSL 5 BASIC12.89□□□□□ -0.35
Vti1aO89116 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Vti1aO89116 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC12.89□□□□□ -0.35
Vti1aO89116 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Vti1aO89116 Gm15782-201ENSMUST00000121073 445 ntBASIC12.89□□□□□ -0.35
Vti1aO89116 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC12.89□□□□□ -0.35
Vti1aO89116 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Vti1aO89116 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Vti1aO89116 Gm42682-201ENSMUST00000198349 1265 ntBASIC12.89□□□□□ -0.35
Vti1aO89116 AC153961.1-201ENSMUST00000217760 385 ntBASIC12.89□□□□□ -0.35
Vti1aO89116 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vti1aO89116 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vti1aO89116 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vti1aO89116 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC12.89□□□□□ -0.35
Vti1aO89116 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Vti1aO89116 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vti1aO89116 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vti1aO89116 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vti1aO89116 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vti1aO89116 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Vti1aO89116 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Vti1aO89116 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Vti1aO89116 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vti1aO89116 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Vti1aO89116 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vti1aO89116 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vti1aO89116 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vti1aO89116 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vti1aO89116 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Vti1aO89116 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vti1aO89116 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vti1aO89116 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vti1aO89116 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vti1aO89116 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vti1aO89116 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Vti1aO89116 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vti1aO89116 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Vti1aO89116 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vti1aO89116 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC12.88□□□□□ -0.35
Vti1aO89116 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Vti1aO89116 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vti1aO89116 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vti1aO89116 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vti1aO89116 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Vti1aO89116 Gm11941-201ENSMUST00000119904 610 ntBASIC12.88□□□□□ -0.35
Vti1aO89116 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Vti1aO89116 Gm23119-201ENSMUST00000158610 140 ntBASIC12.88□□□□□ -0.35
Vti1aO89116 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC12.88□□□□□ -0.35
Vti1aO89116 Gm5733-201ENSMUST00000190232 939 ntBASIC12.88□□□□□ -0.35
Vti1aO89116 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Vti1aO89116 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC12.88□□□□□ -0.35
Vti1aO89116 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Vti1aO89116 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vti1aO89116 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Vti1aO89116 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vti1aO89116 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vti1aO89116 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Vti1aO89116 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vti1aO89116 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Vti1aO89116 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Vti1aO89116 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vti1aO89116 Gm19817-201ENSMUST00000199764 2132 ntBASIC12.88□□□□□ -0.35
Vti1aO89116 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vti1aO89116 Gm14132-201ENSMUST00000117188 1719 ntBASIC12.88□□□□□ -0.35
Vti1aO89116 Gm9361-201ENSMUST00000198695 1507 ntBASIC12.88□□□□□ -0.35
Vti1aO89116 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC12.88□□□□□ -0.35
Vti1aO89116 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vti1aO89116 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC12.88□□□□□ -0.35
Vti1aO89116 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vti1aO89116 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC12.88□□□□□ -0.35
Vti1aO89116 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 137.4 ms