Protein–RNA interactions for Protein: D3Z4R4

Nkx6-2, NK6 homeobox 2, mousemouse

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-2D3Z4R4 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Nkx6-2D3Z4R4 AC135669.1-202ENSMUST00000216742 540 ntBASIC9.63□□□□□ -0.87
Nkx6-2D3Z4R4 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
Nkx6-2D3Z4R4 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Nkx6-2D3Z4R4 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Nkx6-2D3Z4R4 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Nkx6-2D3Z4R4 Gm45234-201ENSMUST00000129411 4359 ntAPPRIS P1 TSL 2 BASIC9.63□□□□□ -0.87
Nkx6-2D3Z4R4 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC9.63□□□□□ -0.87
Nkx6-2D3Z4R4 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Nkx6-2D3Z4R4 Dnajb12-204ENSMUST00000146590 3070 ntAPPRIS P2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Nkx6-2D3Z4R4 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Nkx6-2D3Z4R4 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Nkx6-2D3Z4R4 Thsd7a-206ENSMUST00000172356 10998 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
Nkx6-2D3Z4R4 Slc7a3-203ENSMUST00000113710 2750 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Nkx6-2D3Z4R4 Gon4l-203ENSMUST00000107498 7537 ntAPPRIS P2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Nkx6-2D3Z4R4 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Nkx6-2D3Z4R4 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC9.63□□□□□ -0.87
Nkx6-2D3Z4R4 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Nkx6-2D3Z4R4 Hps4-202ENSMUST00000112359 3345 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
Nkx6-2D3Z4R4 Kalrn-203ENSMUST00000114947 2922 ntTSL 5 BASIC9.62□□□□□ -0.87
Nkx6-2D3Z4R4 Gm37447-201ENSMUST00000195625 2928 ntBASIC9.62□□□□□ -0.87
Nkx6-2D3Z4R4 Olfr1090-202ENSMUST00000215991 2103 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
Nkx6-2D3Z4R4 Ccdc136-202ENSMUST00000115275 3279 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
Nkx6-2D3Z4R4 Marveld2-201ENSMUST00000022137 3061 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Nkx6-2D3Z4R4 Dhx34-207ENSMUST00000163968 3801 ntAPPRIS P2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Nkx6-2D3Z4R4 Samd4-206ENSMUST00000137543 6874 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Nkx6-2D3Z4R4 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Nkx6-2D3Z4R4 Glt1d1-201ENSMUST00000118139 3413 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Nkx6-2D3Z4R4 Calu-201ENSMUST00000031779 3229 ntAPPRIS P5 TSL 1 (best) BASIC9.62□□□□□ -0.87
Nkx6-2D3Z4R4 Ddr1-202ENSMUST00000097333 3593 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Nkx6-2D3Z4R4 Aplp2-202ENSMUST00000079758 3504 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Nkx6-2D3Z4R4 Pcdhgb8-201ENSMUST00000195764 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Nkx6-2D3Z4R4 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC9.62□□□□□ -0.87
Nkx6-2D3Z4R4 Fga-202ENSMUST00000166581 2587 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
Nkx6-2D3Z4R4 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Nkx6-2D3Z4R4 5730460C07Rik-201ENSMUST00000081193 1834 ntTSL 2 BASIC9.62□□□□□ -0.87
Nkx6-2D3Z4R4 Col4a3-201ENSMUST00000113457 8554 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Nkx6-2D3Z4R4 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Nkx6-2D3Z4R4 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Nkx6-2D3Z4R4 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC9.62□□□□□ -0.87
Nkx6-2D3Z4R4 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC9.62□□□□□ -0.87
Nkx6-2D3Z4R4 Gm27622-201ENSMUST00000183779 60 ntBASIC9.62□□□□□ -0.87
Nkx6-2D3Z4R4 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
Nkx6-2D3Z4R4 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC9.62□□□□□ -0.87
Nkx6-2D3Z4R4 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
Nkx6-2D3Z4R4 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC9.62□□□□□ -0.87
Nkx6-2D3Z4R4 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC9.62□□□□□ -0.87
Nkx6-2D3Z4R4 Gm807-202ENSMUST00000224929 408 ntBASIC9.62□□□□□ -0.87
Nkx6-2D3Z4R4 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Nkx6-2D3Z4R4 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Nkx6-2D3Z4R4 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Nkx6-2D3Z4R4 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Nkx6-2D3Z4R4 Gm10175-201ENSMUST00000086013 645 ntBASIC9.62□□□□□ -0.87
Nkx6-2D3Z4R4 Hif1an-201ENSMUST00000040455 6194 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Nkx6-2D3Z4R4 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Nkx6-2D3Z4R4 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Nkx6-2D3Z4R4 Gpsm1-201ENSMUST00000066889 3432 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Nkx6-2D3Z4R4 Slc45a4-207ENSMUST00000151288 7509 ntAPPRIS P2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Nkx6-2D3Z4R4 Gm10699-201ENSMUST00000098916 2130 ntBASIC9.62□□□□□ -0.87
Nkx6-2D3Z4R4 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Nkx6-2D3Z4R4 Frmd4b-201ENSMUST00000032146 3159 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Nkx6-2D3Z4R4 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC9.62□□□□□ -0.87
Nkx6-2D3Z4R4 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
Nkx6-2D3Z4R4 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Nkx6-2D3Z4R4 Myh4-201ENSMUST00000018632 6016 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
Nkx6-2D3Z4R4 AC131029.1-201ENSMUST00000226391 2929 ntBASIC9.62□□□□□ -0.87
Nkx6-2D3Z4R4 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Nkx6-2D3Z4R4 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
Nkx6-2D3Z4R4 A630052C17Rik-201ENSMUST00000129876 2203 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Nkx6-2D3Z4R4 Stox2-206ENSMUST00000210030 2734 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Nkx6-2D3Z4R4 Vwa5b1-201ENSMUST00000030533 7486 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Nkx6-2D3Z4R4 Hnrnpc-210ENSMUST00000228232 2535 ntAPPRIS P5 BASIC9.61□□□□□ -0.87
Nkx6-2D3Z4R4 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Nkx6-2D3Z4R4 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Nkx6-2D3Z4R4 Nlrp6-201ENSMUST00000106045 3823 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
Nkx6-2D3Z4R4 A130010J15Rik-205ENSMUST00000178744 3782 ntAPPRIS P1 TSL 2 BASIC9.61□□□□□ -0.87
Nkx6-2D3Z4R4 AU041133-202ENSMUST00000201286 2634 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Nkx6-2D3Z4R4 Celf1-205ENSMUST00000111449 4441 ntAPPRIS ALT1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Nkx6-2D3Z4R4 AC167022.1-201ENSMUST00000218647 1458 ntBASIC9.61□□□□□ -0.87
Nkx6-2D3Z4R4 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Nkx6-2D3Z4R4 2210010C04Rik-201ENSMUST00000031931 2142 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Nkx6-2D3Z4R4 Fnbp1l-201ENSMUST00000162409 5198 ntTSL 5 BASIC9.61□□□□□ -0.87
Nkx6-2D3Z4R4 Mylk3-202ENSMUST00000121972 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Nkx6-2D3Z4R4 Hrc-201ENSMUST00000085351 2411 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Nkx6-2D3Z4R4 Ctnnd1-223ENSMUST00000111697 5294 ntTSL 5 BASIC9.61□□□□□ -0.87
Nkx6-2D3Z4R4 Pde6c-202ENSMUST00000112329 2895 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Nkx6-2D3Z4R4 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC9.61□□□□□ -0.87
Nkx6-2D3Z4R4 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Nkx6-2D3Z4R4 Gm27533-201ENSMUST00000183800 152 ntBASIC9.61□□□□□ -0.87
Nkx6-2D3Z4R4 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC9.61□□□□□ -0.87
Nkx6-2D3Z4R4 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
Nkx6-2D3Z4R4 AC159114.1-201ENSMUST00000220349 266 ntBASIC9.61□□□□□ -0.87
Nkx6-2D3Z4R4 Retreg1-206ENSMUST00000228306 1430 ntBASIC9.61□□□□□ -0.87
Nkx6-2D3Z4R4 Gtf3c6-206ENSMUST00000217537 2526 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Nkx6-2D3Z4R4 Clec14a-201ENSMUST00000062254 4571 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Nkx6-2D3Z4R4 Gm37660-201ENSMUST00000192754 1732 ntBASIC9.61□□□□□ -0.87
Nkx6-2D3Z4R4 Mdm4-206ENSMUST00000186617 4694 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Nkx6-2D3Z4R4 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Nkx6-2D3Z4R4 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Nkx6-2D3Z4R4 Phtf1os-201ENSMUST00000160110 4046 ntBASIC9.61□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms