Protein–RNA interactions for Protein: B2RS91

Rrn3, RNA polymerase I-specific transcription initiation factor RRN3, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrn3B2RS91 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC12.05□□□□□ -0.48
Rrn3B2RS91 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC12.05□□□□□ -0.48
Rrn3B2RS91 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC12.05□□□□□ -0.48
Rrn3B2RS91 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Rrn3B2RS91 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC12.05□□□□□ -0.48
Rrn3B2RS91 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC12.05□□□□□ -0.48
Rrn3B2RS91 Gm45186-201ENSMUST00000206874 478 ntBASIC12.05□□□□□ -0.48
Rrn3B2RS91 Gm18730-201ENSMUST00000218038 343 ntBASIC12.05□□□□□ -0.48
Rrn3B2RS91 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC12.05□□□□□ -0.48
Rrn3B2RS91 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rrn3B2RS91 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rrn3B2RS91 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rrn3B2RS91 Rassf8-202ENSMUST00000058538 1131 ntBASIC12.05□□□□□ -0.48
Rrn3B2RS91 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rrn3B2RS91 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rrn3B2RS91 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Rrn3B2RS91 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Rrn3B2RS91 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rrn3B2RS91 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Rrn3B2RS91 AC156031.2-201ENSMUST00000213107 3310 ntBASIC12.05□□□□□ -0.48
Rrn3B2RS91 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Rrn3B2RS91 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Rrn3B2RS91 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rrn3B2RS91 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Rrn3B2RS91 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Rrn3B2RS91 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC12.05□□□□□ -0.48
Rrn3B2RS91 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC12.05□□□□□ -0.48
Rrn3B2RS91 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rrn3B2RS91 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Rrn3B2RS91 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Rrn3B2RS91 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC12.05□□□□□ -0.48
Rrn3B2RS91 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rrn3B2RS91 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rrn3B2RS91 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rrn3B2RS91 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rrn3B2RS91 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Rrn3B2RS91 Arhgef3-204ENSMUST00000225949 3198 ntBASIC12.04□□□□□ -0.48
Rrn3B2RS91 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rrn3B2RS91 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Rrn3B2RS91 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC12.04□□□□□ -0.48
Rrn3B2RS91 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC12.04□□□□□ -0.48
Rrn3B2RS91 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Rrn3B2RS91 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Rrn3B2RS91 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC12.04□□□□□ -0.48
Rrn3B2RS91 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rrn3B2RS91 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rrn3B2RS91 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rrn3B2RS91 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rrn3B2RS91 Gm12997-201ENSMUST00000120207 640 ntBASIC12.04□□□□□ -0.48
Rrn3B2RS91 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Rrn3B2RS91 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC12.04□□□□□ -0.48
Rrn3B2RS91 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Rrn3B2RS91 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC12.04□□□□□ -0.48
Rrn3B2RS91 Gstp-ps-201ENSMUST00000195526 631 ntBASIC12.04□□□□□ -0.48
Rrn3B2RS91 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC12.04□□□□□ -0.48
Rrn3B2RS91 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC12.04□□□□□ -0.48
Rrn3B2RS91 Gm19208-201ENSMUST00000213861 912 ntBASIC12.04□□□□□ -0.48
Rrn3B2RS91 AC159747.1-201ENSMUST00000219903 265 ntBASIC12.04□□□□□ -0.48
Rrn3B2RS91 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC12.04□□□□□ -0.48
Rrn3B2RS91 AC159205.5-202ENSMUST00000224849 386 ntBASIC12.04□□□□□ -0.48
Rrn3B2RS91 CT485787.1-201ENSMUST00000225617 968 ntBASIC12.04□□□□□ -0.48
Rrn3B2RS91 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rrn3B2RS91 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Rrn3B2RS91 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rrn3B2RS91 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Rrn3B2RS91 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Rrn3B2RS91 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
Rrn3B2RS91 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC12.04□□□□□ -0.48
Rrn3B2RS91 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC12.04□□□□□ -0.48
Rrn3B2RS91 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rrn3B2RS91 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Rrn3B2RS91 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Rrn3B2RS91 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Rrn3B2RS91 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rrn3B2RS91 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rrn3B2RS91 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rrn3B2RS91 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rrn3B2RS91 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC12.03□□□□□ -0.48
Rrn3B2RS91 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rrn3B2RS91 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rrn3B2RS91 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rrn3B2RS91 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC12.03□□□□□ -0.48
Rrn3B2RS91 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rrn3B2RS91 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rrn3B2RS91 AC113441.2-201ENSMUST00000221538 1468 ntBASIC12.03□□□□□ -0.48
Rrn3B2RS91 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rrn3B2RS91 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rrn3B2RS91 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rrn3B2RS91 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rrn3B2RS91 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rrn3B2RS91 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Rrn3B2RS91 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rrn3B2RS91 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rrn3B2RS91 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rrn3B2RS91 Gm11439-201ENSMUST00000118598 409 ntBASIC12.03□□□□□ -0.48
Rrn3B2RS91 Gm16570-201ENSMUST00000161951 436 ntBASIC12.03□□□□□ -0.48
Rrn3B2RS91 Gm27390-201ENSMUST00000184516 176 ntBASIC12.03□□□□□ -0.48
Rrn3B2RS91 Gm28071-201ENSMUST00000190355 478 ntBASIC12.03□□□□□ -0.48
Rrn3B2RS91 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Rrn3B2RS91 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms