Protein–RNA interactions for Protein: Q9DC53

Cpne8, Copine-8, mousemouse

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne8Q9DC53 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cpne8Q9DC53 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Cpne8Q9DC53 Gm45495-201ENSMUST00000200940 1700 ntBASIC12.42□□□□□ -0.42
Cpne8Q9DC53 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cpne8Q9DC53 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cpne8Q9DC53 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Cpne8Q9DC53 AC129931.1-201ENSMUST00000228865 1861 ntBASIC12.42□□□□□ -0.42
Cpne8Q9DC53 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Cpne8Q9DC53 Gm18222-201ENSMUST00000202416 1387 ntBASIC12.42□□□□□ -0.42
Cpne8Q9DC53 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cpne8Q9DC53 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cpne8Q9DC53 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cpne8Q9DC53 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cpne8Q9DC53 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Cpne8Q9DC53 Gm21939-201ENSMUST00000221137 2773 ntBASIC12.41□□□□□ -0.42
Cpne8Q9DC53 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cpne8Q9DC53 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cpne8Q9DC53 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Cpne8Q9DC53 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cpne8Q9DC53 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Cpne8Q9DC53 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cpne8Q9DC53 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cpne8Q9DC53 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC12.41□□□□□ -0.42
Cpne8Q9DC53 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cpne8Q9DC53 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC12.41□□□□□ -0.42
Cpne8Q9DC53 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cpne8Q9DC53 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Cpne8Q9DC53 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cpne8Q9DC53 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Cpne8Q9DC53 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cpne8Q9DC53 Gm24255-201ENSMUST00000104481 128 ntBASIC12.41□□□□□ -0.42
Cpne8Q9DC53 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC12.41□□□□□ -0.42
Cpne8Q9DC53 Gm14723-201ENSMUST00000118686 215 ntBASIC12.41□□□□□ -0.42
Cpne8Q9DC53 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Cpne8Q9DC53 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Cpne8Q9DC53 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Cpne8Q9DC53 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC12.41□□□□□ -0.42
Cpne8Q9DC53 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC12.41□□□□□ -0.42
Cpne8Q9DC53 Ighv5-7-201ENSMUST00000192302 244 ntBASIC12.41□□□□□ -0.42
Cpne8Q9DC53 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC12.41□□□□□ -0.42
Cpne8Q9DC53 Gm38341-201ENSMUST00000195357 515 ntBASIC12.41□□□□□ -0.42
Cpne8Q9DC53 Gm7118-201ENSMUST00000200167 1003 ntBASIC12.41□□□□□ -0.42
Cpne8Q9DC53 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Cpne8Q9DC53 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC12.41□□□□□ -0.42
Cpne8Q9DC53 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cpne8Q9DC53 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC12.41□□□□□ -0.42
Cpne8Q9DC53 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC12.41□□□□□ -0.42
Cpne8Q9DC53 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC12.41□□□□□ -0.42
Cpne8Q9DC53 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cpne8Q9DC53 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cpne8Q9DC53 Gm5455-201ENSMUST00000058710 715 ntBASIC12.41□□□□□ -0.42
Cpne8Q9DC53 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
Cpne8Q9DC53 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cpne8Q9DC53 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Cpne8Q9DC53 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Cpne8Q9DC53 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC12.41□□□□□ -0.42
Cpne8Q9DC53 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cpne8Q9DC53 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC12.41□□□□□ -0.42
Cpne8Q9DC53 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cpne8Q9DC53 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cpne8Q9DC53 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Cpne8Q9DC53 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Cpne8Q9DC53 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cpne8Q9DC53 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cpne8Q9DC53 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cpne8Q9DC53 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Cpne8Q9DC53 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cpne8Q9DC53 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cpne8Q9DC53 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Cpne8Q9DC53 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Cpne8Q9DC53 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cpne8Q9DC53 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC12.4□□□□□ -0.42
Cpne8Q9DC53 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Cpne8Q9DC53 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC12.4□□□□□ -0.42
Cpne8Q9DC53 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cpne8Q9DC53 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cpne8Q9DC53 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cpne8Q9DC53 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.42
Cpne8Q9DC53 AC173482.6-201ENSMUST00000225889 1741 ntBASIC12.4□□□□□ -0.42
Cpne8Q9DC53 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
Cpne8Q9DC53 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cpne8Q9DC53 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Cpne8Q9DC53 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC12.4□□□□□ -0.42
Cpne8Q9DC53 Gm22323-201ENSMUST00000103832 109 ntBASIC12.4□□□□□ -0.42
Cpne8Q9DC53 Gm4760-201ENSMUST00000119663 1030 ntBASIC12.4□□□□□ -0.42
Cpne8Q9DC53 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC12.4□□□□□ -0.42
Cpne8Q9DC53 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Cpne8Q9DC53 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC12.4□□□□□ -0.42
Cpne8Q9DC53 Gm45598-202ENSMUST00000210719 986 ntBASIC12.4□□□□□ -0.42
Cpne8Q9DC53 Gm18615-201ENSMUST00000222919 1031 ntBASIC12.4□□□□□ -0.42
Cpne8Q9DC53 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cpne8Q9DC53 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cpne8Q9DC53 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cpne8Q9DC53 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Cpne8Q9DC53 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Cpne8Q9DC53 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cpne8Q9DC53 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cpne8Q9DC53 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC12.4□□□□□ -0.42
Cpne8Q9DC53 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cpne8Q9DC53 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms