Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Sf3a3Q9D554 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Sf3a3Q9D554 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
Sf3a3Q9D554 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC12.04□□□□□ -0.48
Sf3a3Q9D554 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC12.04□□□□□ -0.48
Sf3a3Q9D554 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC12.04□□□□□ -0.48
Sf3a3Q9D554 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC12.04□□□□□ -0.48
Sf3a3Q9D554 AC132104.2-201ENSMUST00000215011 266 ntBASIC12.04□□□□□ -0.48
Sf3a3Q9D554 Gm18473-201ENSMUST00000220543 868 ntBASIC12.04□□□□□ -0.48
Sf3a3Q9D554 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sf3a3Q9D554 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sf3a3Q9D554 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Sf3a3Q9D554 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Sf3a3Q9D554 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sf3a3Q9D554 Casc1-203ENSMUST00000111728 2682 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
Sf3a3Q9D554 Acvrl1-201ENSMUST00000000542 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sf3a3Q9D554 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC12.04□□□□□ -0.48
Sf3a3Q9D554 Col20a1-202ENSMUST00000149179 3867 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Sf3a3Q9D554 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Sf3a3Q9D554 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sf3a3Q9D554 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Sf3a3Q9D554 Pcdhga10-201ENSMUST00000193404 4732 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sf3a3Q9D554 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC12.04□□□□□ -0.48
Sf3a3Q9D554 Slc10a7-201ENSMUST00000034111 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sf3a3Q9D554 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sf3a3Q9D554 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC12.04□□□□□ -0.48
Sf3a3Q9D554 Kcnj9-201ENSMUST00000062387 3857 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sf3a3Q9D554 Unkl-201ENSMUST00000015271 3414 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Sf3a3Q9D554 Lama4-201ENSMUST00000019992 6046 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sf3a3Q9D554 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sf3a3Q9D554 Sptan1-204ENSMUST00000113717 7958 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Sf3a3Q9D554 Mical1-203ENSMUST00000119962 3565 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Sf3a3Q9D554 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Sf3a3Q9D554 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC12.03□□□□□ -0.48
Sf3a3Q9D554 Suclg2-201ENSMUST00000079847 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sf3a3Q9D554 Ttll5-202ENSMUST00000040273 4147 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Sf3a3Q9D554 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sf3a3Q9D554 Dlgap1-214ENSMUST00000155016 4712 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sf3a3Q9D554 Oplah-201ENSMUST00000023222 3970 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sf3a3Q9D554 Ndor1-201ENSMUST00000100329 4517 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Sf3a3Q9D554 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC12.03□□□□□ -0.48
Sf3a3Q9D554 Gm9083-201ENSMUST00000120423 819 ntBASIC12.03□□□□□ -0.48
Sf3a3Q9D554 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Sf3a3Q9D554 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC12.03□□□□□ -0.48
Sf3a3Q9D554 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC12.03□□□□□ -0.48
Sf3a3Q9D554 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Sf3a3Q9D554 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC12.03□□□□□ -0.48
Sf3a3Q9D554 Gm44772-201ENSMUST00000207623 1191 ntBASIC12.03□□□□□ -0.48
Sf3a3Q9D554 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sf3a3Q9D554 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Sf3a3Q9D554 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC12.03□□□□□ -0.48
Sf3a3Q9D554 Lsamp-201ENSMUST00000078873 2951 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Sf3a3Q9D554 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sf3a3Q9D554 Tyro3-202ENSMUST00000110783 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sf3a3Q9D554 Stkld1-201ENSMUST00000055406 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sf3a3Q9D554 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Sf3a3Q9D554 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Sf3a3Q9D554 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sf3a3Q9D554 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Sf3a3Q9D554 Sipa1l2-202ENSMUST00000212168 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sf3a3Q9D554 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC12.03□□□□□ -0.48
Sf3a3Q9D554 Capn5-201ENSMUST00000040971 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sf3a3Q9D554 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Sf3a3Q9D554 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Sf3a3Q9D554 Atxn1l-201ENSMUST00000093162 7526 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.48
Sf3a3Q9D554 Synpr-201ENSMUST00000070323 2541 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Sf3a3Q9D554 Sema4a-201ENSMUST00000029700 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Sf3a3Q9D554 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Sf3a3Q9D554 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Sf3a3Q9D554 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Sf3a3Q9D554 Bcl9l-203ENSMUST00000218183 6771 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.48
Sf3a3Q9D554 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Sf3a3Q9D554 Tgfb1i1-201ENSMUST00000070656 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sf3a3Q9D554 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sf3a3Q9D554 Gm3836-201ENSMUST00000211377 1613 ntBASIC12.02□□□□□ -0.49
Sf3a3Q9D554 Rin1-208ENSMUST00000225427 4503 ntAPPRIS P2 BASIC12.02□□□□□ -0.49
Sf3a3Q9D554 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sf3a3Q9D554 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Sf3a3Q9D554 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC12.02□□□□□ -0.49
Sf3a3Q9D554 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Sf3a3Q9D554 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC12.02□□□□□ -0.49
Sf3a3Q9D554 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Sf3a3Q9D554 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC12.02□□□□□ -0.49
Sf3a3Q9D554 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC12.02□□□□□ -0.49
Sf3a3Q9D554 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Sf3a3Q9D554 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC12.02□□□□□ -0.49
Sf3a3Q9D554 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Sf3a3Q9D554 Gm16215-201ENSMUST00000161990 637 ntBASIC12.02□□□□□ -0.49
Sf3a3Q9D554 Dhx34-207ENSMUST00000163968 3801 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sf3a3Q9D554 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC12.02□□□□□ -0.49
Sf3a3Q9D554 Gm6473-201ENSMUST00000188572 1210 ntBASIC12.02□□□□□ -0.49
Sf3a3Q9D554 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Sf3a3Q9D554 AC167013.1-201ENSMUST00000228592 202 ntBASIC12.02□□□□□ -0.49
Sf3a3Q9D554 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sf3a3Q9D554 n-R5s77-201ENSMUST00000083757 119 ntBASIC12.02□□□□□ -0.49
Sf3a3Q9D554 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC12.02□□□□□ -0.49
Sf3a3Q9D554 Tram2-201ENSMUST00000037998 6492 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sf3a3Q9D554 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Sf3a3Q9D554 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC12.02□□□□□ -0.49
Sf3a3Q9D554 Tmc5-203ENSMUST00000121715 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms