Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdh23Q99PF4 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Cdh23Q99PF4 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC11.8□□□□□ -0.52
Cdh23Q99PF4 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cdh23Q99PF4 A430018G15Rik-201ENSMUST00000124210 1314 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cdh23Q99PF4 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdh23Q99PF4 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdh23Q99PF4 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdh23Q99PF4 Gm16209-201ENSMUST00000118457 627 ntBASIC11.8□□□□□ -0.52
Cdh23Q99PF4 Gm10171-201ENSMUST00000126220 628 ntBASIC11.8□□□□□ -0.52
Cdh23Q99PF4 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC11.8□□□□□ -0.52
Cdh23Q99PF4 Gm17207-201ENSMUST00000168686 645 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cdh23Q99PF4 Gm27444-201ENSMUST00000184157 137 ntBASIC11.8□□□□□ -0.52
Cdh23Q99PF4 5830411K02Rik-201ENSMUST00000200000 997 ntBASIC11.8□□□□□ -0.52
Cdh23Q99PF4 Gm45609-204ENSMUST00000209837 1207 ntTSL 5 BASIC11.8□□□□□ -0.52
Cdh23Q99PF4 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdh23Q99PF4 Gm10233-201ENSMUST00000089275 628 ntBASIC11.8□□□□□ -0.52
Cdh23Q99PF4 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Cdh23Q99PF4 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cdh23Q99PF4 Matr3-216ENSMUST00000190653 1846 ntTSL 5 BASIC11.8□□□□□ -0.52
Cdh23Q99PF4 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdh23Q99PF4 Palm2-201ENSMUST00000102904 2958 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdh23Q99PF4 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cdh23Q99PF4 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdh23Q99PF4 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC11.8□□□□□ -0.52
Cdh23Q99PF4 Mir9-3hg-202ENSMUST00000181511 3412 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cdh23Q99PF4 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cdh23Q99PF4 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cdh23Q99PF4 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Cdh23Q99PF4 Gm23582-201ENSMUST00000158530 139 ntBASIC11.79□□□□□ -0.52
Cdh23Q99PF4 Gm7741-201ENSMUST00000181445 989 ntBASIC11.79□□□□□ -0.52
Cdh23Q99PF4 Clec2h-202ENSMUST00000204416 386 ntTSL 3 BASIC11.79□□□□□ -0.52
Cdh23Q99PF4 Rnasek-201ENSMUST00000040428 611 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cdh23Q99PF4 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cdh23Q99PF4 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cdh23Q99PF4 Mtss1l-205ENSMUST00000144041 3225 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cdh23Q99PF4 Atf3-203ENSMUST00000195117 1906 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cdh23Q99PF4 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cdh23Q99PF4 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cdh23Q99PF4 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cdh23Q99PF4 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cdh23Q99PF4 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cdh23Q99PF4 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cdh23Q99PF4 Atp6v1c2-202ENSMUST00000095820 1549 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cdh23Q99PF4 Prss57-201ENSMUST00000020573 2693 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cdh23Q99PF4 Gm24933-201ENSMUST00000103762 110 ntBASIC11.79□□□□□ -0.52
Cdh23Q99PF4 Gm23252-201ENSMUST00000103776 110 ntBASIC11.79□□□□□ -0.52
Cdh23Q99PF4 Gm24992-201ENSMUST00000157412 130 ntBASIC11.79□□□□□ -0.52
Cdh23Q99PF4 Gm26443-201ENSMUST00000179610 110 ntBASIC11.79□□□□□ -0.52
Cdh23Q99PF4 Gm8824-201ENSMUST00000182962 990 ntBASIC11.79□□□□□ -0.52
Cdh23Q99PF4 Gm9369-201ENSMUST00000196009 733 ntBASIC11.79□□□□□ -0.52
Cdh23Q99PF4 Gm5996-201ENSMUST00000211110 718 ntBASIC11.79□□□□□ -0.52
Cdh23Q99PF4 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cdh23Q99PF4 Gm5740-201ENSMUST00000211003 1857 ntBASIC11.79□□□□□ -0.52
Cdh23Q99PF4 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cdh23Q99PF4 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cdh23Q99PF4 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cdh23Q99PF4 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC11.79□□□□□ -0.52
Cdh23Q99PF4 Prf1-201ENSMUST00000035419 1968 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cdh23Q99PF4 Blvra-202ENSMUST00000110389 657 ntTSL 3 BASIC11.79□□□□□ -0.52
Cdh23Q99PF4 Gm5638-201ENSMUST00000118618 1258 ntBASIC11.79□□□□□ -0.52
Cdh23Q99PF4 Gsta3-202ENSMUST00000121676 894 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Cdh23Q99PF4 Pla2g1b-204ENSMUST00000145785 419 ntTSL 5 BASIC11.79□□□□□ -0.52
Cdh23Q99PF4 Gm14275-201ENSMUST00000152112 430 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cdh23Q99PF4 Tex33-202ENSMUST00000165170 1072 ntAPPRIS P4 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cdh23Q99PF4 Gm5976-201ENSMUST00000180794 996 ntBASIC11.79□□□□□ -0.52
Cdh23Q99PF4 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cdh23Q99PF4 Tex33-201ENSMUST00000074380 1147 ntAPPRIS P4 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cdh23Q99PF4 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC11.79□□□□□ -0.52
Cdh23Q99PF4 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cdh23Q99PF4 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cdh23Q99PF4 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cdh23Q99PF4 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC11.79□□□□□ -0.52
Cdh23Q99PF4 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cdh23Q99PF4 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC11.78□□□□□ -0.52
Cdh23Q99PF4 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC11.78□□□□□ -0.52
Cdh23Q99PF4 Hspa2-201ENSMUST00000080449 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cdh23Q99PF4 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Cdh23Q99PF4 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Cdh23Q99PF4 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Cdh23Q99PF4 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cdh23Q99PF4 Styxl1-203ENSMUST00000111162 726 ntTSL 5 BASIC11.78□□□□□ -0.52
Cdh23Q99PF4 Erg-209ENSMUST00000177450 1280 ntTSL 5 BASIC11.78□□□□□ -0.52
Cdh23Q99PF4 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Cdh23Q99PF4 Gm37365-201ENSMUST00000193109 409 ntBASIC11.78□□□□□ -0.52
Cdh23Q99PF4 AC103672.1-201ENSMUST00000227502 365 ntBASIC11.78□□□□□ -0.52
Cdh23Q99PF4 Rpl9-201ENSMUST00000057885 738 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cdh23Q99PF4 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Cdh23Q99PF4 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Cdh23Q99PF4 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Cdh23Q99PF4 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cdh23Q99PF4 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cdh23Q99PF4 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Cdh23Q99PF4 Usp2-208ENSMUST00000177054 2370 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Cdh23Q99PF4 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cdh23Q99PF4 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Cdh23Q99PF4 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cdh23Q99PF4 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Cdh23Q99PF4 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cdh23Q99PF4 Gm15197-201ENSMUST00000120526 478 ntBASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms