Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC11.61□□□□□ -0.55
Rnf111Q99ML9 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rnf111Q99ML9 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rnf111Q99ML9 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Rnf111Q99ML9 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Rnf111Q99ML9 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rnf111Q99ML9 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
Rnf111Q99ML9 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC11.61□□□□□ -0.55
Rnf111Q99ML9 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rnf111Q99ML9 Gm2673-201ENSMUST00000120958 1608 ntBASIC11.6□□□□□ -0.55
Rnf111Q99ML9 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC11.6□□□□□ -0.55
Rnf111Q99ML9 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC11.6□□□□□ -0.55
Rnf111Q99ML9 Gm4780-202ENSMUST00000215200 2644 ntBASIC11.6□□□□□ -0.55
Rnf111Q99ML9 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Rnf111Q99ML9 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rnf111Q99ML9 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Rnf111Q99ML9 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Rnf111Q99ML9 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC11.6□□□□□ -0.55
Rnf111Q99ML9 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rnf111Q99ML9 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rnf111Q99ML9 Gm11531-201ENSMUST00000117614 555 ntBASIC11.6□□□□□ -0.55
Rnf111Q99ML9 Gm13297-201ENSMUST00000120205 934 ntBASIC11.6□□□□□ -0.55
Rnf111Q99ML9 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Rnf111Q99ML9 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Rnf111Q99ML9 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Rnf111Q99ML9 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC11.6□□□□□ -0.55
Rnf111Q99ML9 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC11.6□□□□□ -0.55
Rnf111Q99ML9 Gm27516-201ENSMUST00000184237 98 ntBASIC11.6□□□□□ -0.55
Rnf111Q99ML9 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC11.6□□□□□ -0.55
Rnf111Q99ML9 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Rnf111Q99ML9 Gm44958-201ENSMUST00000203734 736 ntBASIC11.6□□□□□ -0.55
Rnf111Q99ML9 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC11.6□□□□□ -0.55
Rnf111Q99ML9 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Rnf111Q99ML9 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Rnf111Q99ML9 Gm8399-201ENSMUST00000082300 1117 ntBASIC11.6□□□□□ -0.55
Rnf111Q99ML9 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rnf111Q99ML9 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Rnf111Q99ML9 CT573086.2-201ENSMUST00000227277 4992 ntBASIC11.6□□□□□ -0.55
Rnf111Q99ML9 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rnf111Q99ML9 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rnf111Q99ML9 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC11.6□□□□□ -0.55
Rnf111Q99ML9 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rnf111Q99ML9 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rnf111Q99ML9 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Rnf111Q99ML9 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rnf111Q99ML9 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Rnf111Q99ML9 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Rnf111Q99ML9 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rnf111Q99ML9 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rnf111Q99ML9 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rnf111Q99ML9 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rnf111Q99ML9 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Rnf111Q99ML9 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rnf111Q99ML9 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rnf111Q99ML9 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rnf111Q99ML9 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC11.59□□□□□ -0.55
Rnf111Q99ML9 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rnf111Q99ML9 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rnf111Q99ML9 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Rnf111Q99ML9 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC11.59□□□□□ -0.55
Rnf111Q99ML9 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC11.59□□□□□ -0.55
Rnf111Q99ML9 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Rnf111Q99ML9 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rnf111Q99ML9 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Rnf111Q99ML9 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rnf111Q99ML9 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Rnf111Q99ML9 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rnf111Q99ML9 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Rnf111Q99ML9 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rnf111Q99ML9 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rnf111Q99ML9 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Rnf111Q99ML9 Gm15198-201ENSMUST00000117283 177 ntBASIC11.59□□□□□ -0.55
Rnf111Q99ML9 Gm12241-201ENSMUST00000118330 726 ntBASIC11.59□□□□□ -0.55
Rnf111Q99ML9 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC11.59□□□□□ -0.55
Rnf111Q99ML9 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC11.59□□□□□ -0.55
Rnf111Q99ML9 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC11.59□□□□□ -0.55
Rnf111Q99ML9 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC11.59□□□□□ -0.55
Rnf111Q99ML9 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Rnf111Q99ML9 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC11.59□□□□□ -0.55
Rnf111Q99ML9 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Rnf111Q99ML9 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC11.59□□□□□ -0.55
Rnf111Q99ML9 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Rnf111Q99ML9 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC11.59□□□□□ -0.55
Rnf111Q99ML9 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC11.59□□□□□ -0.55
Rnf111Q99ML9 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC11.59□□□□□ -0.55
Rnf111Q99ML9 AC159896.2-201ENSMUST00000214753 269 ntBASIC11.59□□□□□ -0.55
Rnf111Q99ML9 AC154319.1-201ENSMUST00000216330 312 ntBASIC11.59□□□□□ -0.55
Rnf111Q99ML9 AL589735.1-201ENSMUST00000224353 270 ntBASIC11.59□□□□□ -0.55
Rnf111Q99ML9 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rnf111Q99ML9 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rnf111Q99ML9 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rnf111Q99ML9 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rnf111Q99ML9 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rnf111Q99ML9 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC11.59□□□□□ -0.55
Rnf111Q99ML9 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rnf111Q99ML9 AC167669.2-201ENSMUST00000224417 1620 ntBASIC11.59□□□□□ -0.55
Rnf111Q99ML9 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rnf111Q99ML9 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Rnf111Q99ML9 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Rnf111Q99ML9 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 65.8 ms