Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nkx6-1Q99MA9 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Nkx6-1Q99MA9 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nkx6-1Q99MA9 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nkx6-1Q99MA9 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Nkx6-1Q99MA9 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Nkx6-1Q99MA9 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Nkx6-1Q99MA9 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nkx6-1Q99MA9 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC11.26□□□□□ -0.61
Nkx6-1Q99MA9 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nkx6-1Q99MA9 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nkx6-1Q99MA9 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC11.26□□□□□ -0.61
Nkx6-1Q99MA9 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nkx6-1Q99MA9 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC11.26□□□□□ -0.61
Nkx6-1Q99MA9 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Nkx6-1Q99MA9 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nkx6-1Q99MA9 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Nkx6-1Q99MA9 Cenpx-203ENSMUST00000106154 873 ntTSL 2 BASIC11.26□□□□□ -0.61
Nkx6-1Q99MA9 Gm25545-201ENSMUST00000122673 323 ntBASIC11.26□□□□□ -0.61
Nkx6-1Q99MA9 Gm21972-201ENSMUST00000135197 776 ntAPPRIS P1 TSL 3 BASIC11.26□□□□□ -0.61
Nkx6-1Q99MA9 Gm14154-201ENSMUST00000142642 579 ntTSL 3 BASIC11.26□□□□□ -0.61
Nkx6-1Q99MA9 Gm15744-201ENSMUST00000161734 213 ntBASIC11.26□□□□□ -0.61
Nkx6-1Q99MA9 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Nkx6-1Q99MA9 Mir6923-201ENSMUST00000184592 72 ntBASIC11.26□□□□□ -0.61
Nkx6-1Q99MA9 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nkx6-1Q99MA9 Eef1b2-209ENSMUST00000188524 681 ntTSL 3 BASIC11.26□□□□□ -0.61
Nkx6-1Q99MA9 Gm9116-201ENSMUST00000192400 1018 ntBASIC11.26□□□□□ -0.61
Nkx6-1Q99MA9 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nkx6-1Q99MA9 Gm3619-201ENSMUST00000219947 775 ntBASIC11.26□□□□□ -0.61
Nkx6-1Q99MA9 Mgp-201ENSMUST00000032342 617 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nkx6-1Q99MA9 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Nkx6-1Q99MA9 Tmem220-202ENSMUST00000079077 1147 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nkx6-1Q99MA9 Ccdc153-201ENSMUST00000092426 1087 ntAPPRIS P2 TSL 2 BASIC11.26□□□□□ -0.61
Nkx6-1Q99MA9 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nkx6-1Q99MA9 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Nkx6-1Q99MA9 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nkx6-1Q99MA9 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nkx6-1Q99MA9 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nkx6-1Q99MA9 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nkx6-1Q99MA9 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Nkx6-1Q99MA9 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nkx6-1Q99MA9 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nkx6-1Q99MA9 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Nkx6-1Q99MA9 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nkx6-1Q99MA9 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nkx6-1Q99MA9 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nkx6-1Q99MA9 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Nkx6-1Q99MA9 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Nkx6-1Q99MA9 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nkx6-1Q99MA9 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nkx6-1Q99MA9 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nkx6-1Q99MA9 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Nkx6-1Q99MA9 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nkx6-1Q99MA9 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nkx6-1Q99MA9 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Nkx6-1Q99MA9 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC11.26□□□□□ -0.61
Nkx6-1Q99MA9 5530401A14Rik-201ENSMUST00000021044 1836 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx6-1Q99MA9 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx6-1Q99MA9 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx6-1Q99MA9 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx6-1Q99MA9 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx6-1Q99MA9 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx6-1Q99MA9 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx6-1Q99MA9 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx6-1Q99MA9 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx6-1Q99MA9 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC11.25□□□□□ -0.61
Nkx6-1Q99MA9 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC11.25□□□□□ -0.61
Nkx6-1Q99MA9 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx6-1Q99MA9 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx6-1Q99MA9 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx6-1Q99MA9 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx6-1Q99MA9 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Nkx6-1Q99MA9 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx6-1Q99MA9 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx6-1Q99MA9 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx6-1Q99MA9 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx6-1Q99MA9 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx6-1Q99MA9 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx6-1Q99MA9 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx6-1Q99MA9 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Nkx6-1Q99MA9 Rbmx2-ps-201ENSMUST00000119377 930 ntBASIC11.25□□□□□ -0.61
Nkx6-1Q99MA9 Gm13022-201ENSMUST00000121181 285 ntBASIC11.25□□□□□ -0.61
Nkx6-1Q99MA9 Snhg17-205ENSMUST00000151331 529 ntTSL 2 BASIC11.25□□□□□ -0.61
Nkx6-1Q99MA9 BC016548-202ENSMUST00000153797 805 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx6-1Q99MA9 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC11.25□□□□□ -0.61
Nkx6-1Q99MA9 Gm18367-201ENSMUST00000176139 600 ntBASIC11.25□□□□□ -0.61
Nkx6-1Q99MA9 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC11.25□□□□□ -0.61
Nkx6-1Q99MA9 Gm5714-201ENSMUST00000197343 566 ntBASIC11.25□□□□□ -0.61
Nkx6-1Q99MA9 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC11.25□□□□□ -0.61
Nkx6-1Q99MA9 Gm18463-201ENSMUST00000207258 474 ntBASIC11.25□□□□□ -0.61
Nkx6-1Q99MA9 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC11.25□□□□□ -0.61
Nkx6-1Q99MA9 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC11.25□□□□□ -0.61
Nkx6-1Q99MA9 AC124433.1-201ENSMUST00000224483 1063 ntBASIC11.25□□□□□ -0.61
Nkx6-1Q99MA9 AC093022.5-201ENSMUST00000226841 1079 ntBASIC11.25□□□□□ -0.61
Nkx6-1Q99MA9 AC136376.2-201ENSMUST00000228819 490 ntBASIC11.25□□□□□ -0.61
Nkx6-1Q99MA9 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx6-1Q99MA9 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Nkx6-1Q99MA9 1700029P11Rik-201ENSMUST00000074608 1024 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Nkx6-1Q99MA9 Gm42480-201ENSMUST00000198434 2595 ntBASIC11.25□□□□□ -0.61
Nkx6-1Q99MA9 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 82.5 ms