Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
Cstf3Q99LI7 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC11.57□□□□□ -0.56
Cstf3Q99LI7 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cstf3Q99LI7 Dgkh-202ENSMUST00000226342 15261 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Cstf3Q99LI7 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Cstf3Q99LI7 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Cstf3Q99LI7 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Cstf3Q99LI7 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cstf3Q99LI7 Myo18a-207ENSMUST00000102488 7409 ntAPPRIS P3 TSL 5 BASIC11.56□□□□□ -0.56
Cstf3Q99LI7 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Cstf3Q99LI7 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cstf3Q99LI7 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cstf3Q99LI7 AC160410.1-201ENSMUST00000219298 1972 ntBASIC11.56□□□□□ -0.56
Cstf3Q99LI7 Gm43172-201ENSMUST00000202139 2137 ntBASIC11.56□□□□□ -0.56
Cstf3Q99LI7 Nedd9-202ENSMUST00000163623 4626 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cstf3Q99LI7 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cstf3Q99LI7 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Cstf3Q99LI7 Gm15370-201ENSMUST00000117158 253 ntBASIC11.56□□□□□ -0.56
Cstf3Q99LI7 Gm11222-201ENSMUST00000119005 738 ntBASIC11.56□□□□□ -0.56
Cstf3Q99LI7 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC11.56□□□□□ -0.56
Cstf3Q99LI7 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC11.56□□□□□ -0.56
Cstf3Q99LI7 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC11.56□□□□□ -0.56
Cstf3Q99LI7 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Cstf3Q99LI7 Gm17931-201ENSMUST00000208132 634 ntBASIC11.56□□□□□ -0.56
Cstf3Q99LI7 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cstf3Q99LI7 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC11.56□□□□□ -0.56
Cstf3Q99LI7 AC166344.1-202ENSMUST00000224139 234 ntBASIC11.56□□□□□ -0.56
Cstf3Q99LI7 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cstf3Q99LI7 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cstf3Q99LI7 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cstf3Q99LI7 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Cstf3Q99LI7 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Cstf3Q99LI7 Med13l-201ENSMUST00000100816 9296 ntAPPRIS P3 TSL 2 BASIC11.56□□□□□ -0.56
Cstf3Q99LI7 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cstf3Q99LI7 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cstf3Q99LI7 AC093022.4-203ENSMUST00000228523 2657 ntBASIC11.56□□□□□ -0.56
Cstf3Q99LI7 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Cstf3Q99LI7 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cstf3Q99LI7 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cstf3Q99LI7 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cstf3Q99LI7 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cstf3Q99LI7 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Cstf3Q99LI7 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC11.55□□□□□ -0.56
Cstf3Q99LI7 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Cstf3Q99LI7 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cstf3Q99LI7 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cstf3Q99LI7 Gm42913-201ENSMUST00000197936 1853 ntBASIC11.55□□□□□ -0.56
Cstf3Q99LI7 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cstf3Q99LI7 Megf8-201ENSMUST00000128119 10040 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cstf3Q99LI7 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cstf3Q99LI7 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cstf3Q99LI7 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cstf3Q99LI7 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cstf3Q99LI7 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Cstf3Q99LI7 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Cstf3Q99LI7 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Cstf3Q99LI7 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC11.55□□□□□ -0.56
Cstf3Q99LI7 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cstf3Q99LI7 Gm38241-201ENSMUST00000192641 898 ntBASIC11.55□□□□□ -0.56
Cstf3Q99LI7 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cstf3Q99LI7 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Cstf3Q99LI7 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Cstf3Q99LI7 AC132384.14-201ENSMUST00000219346 1147 ntBASIC11.55□□□□□ -0.56
Cstf3Q99LI7 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cstf3Q99LI7 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cstf3Q99LI7 Gm10312-201ENSMUST00000078515 489 ntBASIC11.55□□□□□ -0.56
Cstf3Q99LI7 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC11.55□□□□□ -0.56
Cstf3Q99LI7 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cstf3Q99LI7 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Cstf3Q99LI7 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Cstf3Q99LI7 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cstf3Q99LI7 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cstf3Q99LI7 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Cstf3Q99LI7 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cstf3Q99LI7 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cstf3Q99LI7 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cstf3Q99LI7 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Cstf3Q99LI7 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cstf3Q99LI7 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
Cstf3Q99LI7 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC11.54□□□□□ -0.56
Cstf3Q99LI7 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cstf3Q99LI7 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cstf3Q99LI7 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cstf3Q99LI7 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC11.54□□□□□ -0.56
Cstf3Q99LI7 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC11.54□□□□□ -0.56
Cstf3Q99LI7 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Cstf3Q99LI7 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cstf3Q99LI7 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Cstf3Q99LI7 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cstf3Q99LI7 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cstf3Q99LI7 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Cstf3Q99LI7 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC11.54□□□□□ -0.56
Cstf3Q99LI7 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cstf3Q99LI7 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cstf3Q99LI7 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC11.54□□□□□ -0.56
Cstf3Q99LI7 Gm15547-201ENSMUST00000122152 333 ntBASIC11.54□□□□□ -0.56
Cstf3Q99LI7 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC11.54□□□□□ -0.56
Cstf3Q99LI7 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC11.54□□□□□ -0.56
Cstf3Q99LI7 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Cstf3Q99LI7 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC11.54□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 69.2 ms