Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC12.19□□□□□ -0.46
Pcdhb3Q91XZ7 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhb3Q91XZ7 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC12.19□□□□□ -0.46
Pcdhb3Q91XZ7 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhb3Q91XZ7 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhb3Q91XZ7 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhb3Q91XZ7 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhb3Q91XZ7 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhb3Q91XZ7 1110051M20Rik-201ENSMUST00000064652 2896 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhb3Q91XZ7 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhb3Q91XZ7 Mknk2-201ENSMUST00000003433 3065 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhb3Q91XZ7 Mir669o-201ENSMUST00000103898 96 ntBASIC12.19□□□□□ -0.46
Pcdhb3Q91XZ7 Gm10230-201ENSMUST00000119362 867 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhb3Q91XZ7 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhb3Q91XZ7 Gm9728-201ENSMUST00000200197 1055 ntBASIC12.19□□□□□ -0.46
Pcdhb3Q91XZ7 Gm35216-201ENSMUST00000203777 433 ntTSL 2 BASIC12.19□□□□□ -0.46
Pcdhb3Q91XZ7 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Pcdhb3Q91XZ7 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC12.19□□□□□ -0.46
Pcdhb3Q91XZ7 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhb3Q91XZ7 Pate4-201ENSMUST00000034610 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhb3Q91XZ7 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhb3Q91XZ7 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhb3Q91XZ7 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC12.19□□□□□ -0.46
Pcdhb3Q91XZ7 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhb3Q91XZ7 Gm15544-201ENSMUST00000118776 1531 ntBASIC12.19□□□□□ -0.46
Pcdhb3Q91XZ7 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhb3Q91XZ7 Gm43858-201ENSMUST00000199418 1778 ntBASIC12.19□□□□□ -0.46
Pcdhb3Q91XZ7 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Pcdhb3Q91XZ7 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
Pcdhb3Q91XZ7 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Pcdhb3Q91XZ7 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhb3Q91XZ7 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC12.19□□□□□ -0.46
Pcdhb3Q91XZ7 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhb3Q91XZ7 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC12.19□□□□□ -0.46
Pcdhb3Q91XZ7 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Pcdhb3Q91XZ7 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhb3Q91XZ7 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhb3Q91XZ7 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhb3Q91XZ7 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhb3Q91XZ7 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhb3Q91XZ7 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhb3Q91XZ7 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhb3Q91XZ7 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhb3Q91XZ7 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhb3Q91XZ7 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
Pcdhb3Q91XZ7 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhb3Q91XZ7 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhb3Q91XZ7 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhb3Q91XZ7 Ugt1a10-201ENSMUST00000113142 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhb3Q91XZ7 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhb3Q91XZ7 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Pcdhb3Q91XZ7 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhb3Q91XZ7 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhb3Q91XZ7 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhb3Q91XZ7 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhb3Q91XZ7 Gm16440-201ENSMUST00000100900 1089 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Pcdhb3Q91XZ7 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
Pcdhb3Q91XZ7 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC12.18□□□□□ -0.46
Pcdhb3Q91XZ7 Gm21103-201ENSMUST00000112737 984 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Pcdhb3Q91XZ7 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhb3Q91XZ7 Gm5638-201ENSMUST00000118618 1258 ntBASIC12.18□□□□□ -0.46
Pcdhb3Q91XZ7 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC12.18□□□□□ -0.46
Pcdhb3Q91XZ7 Gm22331-201ENSMUST00000158066 136 ntBASIC12.18□□□□□ -0.46
Pcdhb3Q91XZ7 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhb3Q91XZ7 Gm3047-201ENSMUST00000164069 822 ntAPPRIS P5 TSL 5 BASIC12.18□□□□□ -0.46
Pcdhb3Q91XZ7 Gm3029-201ENSMUST00000168306 984 ntAPPRIS P5 TSL 5 BASIC12.18□□□□□ -0.46
Pcdhb3Q91XZ7 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC12.18□□□□□ -0.46
Pcdhb3Q91XZ7 Gm7876-201ENSMUST00000169465 984 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Pcdhb3Q91XZ7 Gm3043-201ENSMUST00000170639 821 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhb3Q91XZ7 Proscos-202ENSMUST00000178990 666 ntBASIC12.18□□□□□ -0.46
Pcdhb3Q91XZ7 Gm26763-201ENSMUST00000180968 1093 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhb3Q91XZ7 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhb3Q91XZ7 Gm28766-201ENSMUST00000191086 234 ntBASIC12.18□□□□□ -0.46
Pcdhb3Q91XZ7 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC12.18□□□□□ -0.46
Pcdhb3Q91XZ7 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC12.18□□□□□ -0.46
Pcdhb3Q91XZ7 Gm44237-201ENSMUST00000205183 936 ntBASIC12.18□□□□□ -0.46
Pcdhb3Q91XZ7 Olfr206-202ENSMUST00000207927 1122 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Pcdhb3Q91XZ7 4930442G15Rik-201ENSMUST00000213112 1000 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhb3Q91XZ7 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhb3Q91XZ7 AC115784.1-201ENSMUST00000227687 1010 ntBASIC12.18□□□□□ -0.46
Pcdhb3Q91XZ7 AC122459.1-201ENSMUST00000228373 885 ntBASIC12.18□□□□□ -0.46
Pcdhb3Q91XZ7 9230110F15Rik-201ENSMUST00000054175 1135 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhb3Q91XZ7 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhb3Q91XZ7 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhb3Q91XZ7 Ica1-204ENSMUST00000115520 1876 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
Pcdhb3Q91XZ7 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhb3Q91XZ7 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhb3Q91XZ7 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhb3Q91XZ7 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC12.18□□□□□ -0.46
Pcdhb3Q91XZ7 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhb3Q91XZ7 Tm9sf1-202ENSMUST00000120041 2164 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Pcdhb3Q91XZ7 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhb3Q91XZ7 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhb3Q91XZ7 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC12.17□□□□□ -0.46
Pcdhb3Q91XZ7 Parvg-207ENSMUST00000163667 2700 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Pcdhb3Q91XZ7 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC12.17□□□□□ -0.46
Pcdhb3Q91XZ7 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdhb3Q91XZ7 Shoc2-201ENSMUST00000025932 4106 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdhb3Q91XZ7 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdhb3Q91XZ7 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 61.4 ms