Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc9Q8VC31 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Ccdc9Q8VC31 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc9Q8VC31 Gm21854-201ENSMUST00000179901 471 ntBASIC14.37□□□□□ -0.11
Ccdc9Q8VC31 Gm9522-201ENSMUST00000182394 926 ntBASIC14.37□□□□□ -0.11
Ccdc9Q8VC31 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC14.37□□□□□ -0.11
Ccdc9Q8VC31 Hist1h2al-201ENSMUST00000091708 339 ntBASIC14.37□□□□□ -0.11
Ccdc9Q8VC31 Carns1-201ENSMUST00000167055 3968 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Ccdc9Q8VC31 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc9Q8VC31 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc9Q8VC31 U2af1l4-237ENSMUST00000167042 3007 ntAPPRIS P5 TSL 2 BASIC14.37□□□□□ -0.11
Ccdc9Q8VC31 Armcx3-203ENSMUST00000086884 3488 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Ccdc9Q8VC31 Col24a1-201ENSMUST00000029848 7143 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc9Q8VC31 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc9Q8VC31 Ncstn-201ENSMUST00000003550 2901 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc9Q8VC31 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc9Q8VC31 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc9Q8VC31 Trem1-201ENSMUST00000048782 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc9Q8VC31 Syn2-202ENSMUST00000169345 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc9Q8VC31 Kansl1-201ENSMUST00000018556 5061 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc9Q8VC31 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC14.36□□□□□ -0.11
Ccdc9Q8VC31 Tasp1-203ENSMUST00000110079 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc9Q8VC31 Actl7a-201ENSMUST00000095079 1513 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Ccdc9Q8VC31 Gm5740-201ENSMUST00000211003 1857 ntBASIC14.36□□□□□ -0.11
Ccdc9Q8VC31 Tmem231-201ENSMUST00000034429 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc9Q8VC31 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Ccdc9Q8VC31 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc9Q8VC31 Sorbs1-201ENSMUST00000099466 2223 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Ccdc9Q8VC31 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc9Q8VC31 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc9Q8VC31 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc9Q8VC31 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC14.36□□□□□ -0.11
Ccdc9Q8VC31 Gm29667-201ENSMUST00000190817 490 ntBASIC14.36□□□□□ -0.11
Ccdc9Q8VC31 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc9Q8VC31 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC14.36□□□□□ -0.11
Ccdc9Q8VC31 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC14.36□□□□□ -0.11
Ccdc9Q8VC31 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc9Q8VC31 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc9Q8VC31 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC14.36□□□□□ -0.11
Ccdc9Q8VC31 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc9Q8VC31 Kalrn-202ENSMUST00000089655 6506 ntTSL 5 BASIC14.36□□□□□ -0.11
Ccdc9Q8VC31 Ntrk3-206ENSMUST00000195262 2774 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Ccdc9Q8VC31 Anxa6-202ENSMUST00000108883 2489 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc9Q8VC31 Pa2g4-202ENSMUST00000131728 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc9Q8VC31 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc9Q8VC31 AC138329.2-201ENSMUST00000225579 1842 ntBASIC14.36□□□□□ -0.11
Ccdc9Q8VC31 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Ccdc9Q8VC31 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc9Q8VC31 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC14.36□□□□□ -0.11
Ccdc9Q8VC31 Fastkd5-201ENSMUST00000110262 3015 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Ccdc9Q8VC31 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Ccdc9Q8VC31 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc9Q8VC31 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc9Q8VC31 Pcdhb9-201ENSMUST00000057228 3055 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Ccdc9Q8VC31 1700018A04Rik-204ENSMUST00000221561 2569 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc9Q8VC31 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc9Q8VC31 Rapgef4os2-201ENSMUST00000128165 2116 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc9Q8VC31 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
Ccdc9Q8VC31 4933413J09Rik-202ENSMUST00000059648 3387 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc9Q8VC31 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Ccdc9Q8VC31 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc9Q8VC31 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc9Q8VC31 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc9Q8VC31 Fyb2-202ENSMUST00000106804 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc9Q8VC31 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC14.35□□□□□ -0.11
Ccdc9Q8VC31 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC14.35□□□□□ -0.11
Ccdc9Q8VC31 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC14.35□□□□□ -0.11
Ccdc9Q8VC31 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC14.35□□□□□ -0.11
Ccdc9Q8VC31 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc9Q8VC31 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC14.35□□□□□ -0.11
Ccdc9Q8VC31 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC14.35□□□□□ -0.11
Ccdc9Q8VC31 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc9Q8VC31 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc9Q8VC31 Gm20949-201ENSMUST00000206478 952 ntBASIC14.35□□□□□ -0.11
Ccdc9Q8VC31 Gm17795-201ENSMUST00000214505 757 ntBASIC14.35□□□□□ -0.11
Ccdc9Q8VC31 AC134335.2-201ENSMUST00000227660 440 ntBASIC14.35□□□□□ -0.11
Ccdc9Q8VC31 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc9Q8VC31 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc9Q8VC31 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC14.35□□□□□ -0.11
Ccdc9Q8VC31 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Ccdc9Q8VC31 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Ccdc9Q8VC31 Gm42690-201ENSMUST00000197921 1836 ntBASIC14.35□□□□□ -0.11
Ccdc9Q8VC31 AC160340.2-201ENSMUST00000220812 3675 ntBASIC14.35□□□□□ -0.11
Ccdc9Q8VC31 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Ccdc9Q8VC31 Tmem184a-202ENSMUST00000110832 4326 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc9Q8VC31 Qtrt2-201ENSMUST00000023387 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc9Q8VC31 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc9Q8VC31 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc9Q8VC31 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc9Q8VC31 Edil3-202ENSMUST00000081769 5317 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc9Q8VC31 Pax6-204ENSMUST00000111083 2370 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
Ccdc9Q8VC31 Fgl2-201ENSMUST00000035799 3788 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc9Q8VC31 Atp9b-201ENSMUST00000091790 5357 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Ccdc9Q8VC31 Ghsr-201ENSMUST00000057186 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc9Q8VC31 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc9Q8VC31 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc9Q8VC31 Uba1-201ENSMUST00000001989 4071 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc9Q8VC31 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC14.34□□□□□ -0.11
Ccdc9Q8VC31 Kcne2-201ENSMUST00000047383 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc9Q8VC31 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 65.6 ms