Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chmp7Q8R1T1 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Chmp7Q8R1T1 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Chmp7Q8R1T1 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Chmp7Q8R1T1 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Chmp7Q8R1T1 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Chmp7Q8R1T1 Gm36970-201ENSMUST00000193688 1859 ntBASIC15.25■□□□□ 0.03
Chmp7Q8R1T1 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Chmp7Q8R1T1 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Chmp7Q8R1T1 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Chmp7Q8R1T1 Ntrk2-209ENSMUST00000225950 2640 ntBASIC15.25■□□□□ 0.03
Chmp7Q8R1T1 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Chmp7Q8R1T1 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Chmp7Q8R1T1 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Chmp7Q8R1T1 Adra1a-206ENSMUST00000225182 2337 ntBASIC15.25■□□□□ 0.03
Chmp7Q8R1T1 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC15.25■□□□□ 0.03
Chmp7Q8R1T1 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Chmp7Q8R1T1 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Chmp7Q8R1T1 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
Chmp7Q8R1T1 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Chmp7Q8R1T1 Tlx1-202ENSMUST00000174617 806 ntTSL 5 BASIC15.25■□□□□ 0.03
Chmp7Q8R1T1 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Chmp7Q8R1T1 Gm28937-201ENSMUST00000185413 695 ntBASIC15.25■□□□□ 0.03
Chmp7Q8R1T1 Gm29400-201ENSMUST00000187208 695 ntBASIC15.25■□□□□ 0.03
Chmp7Q8R1T1 Gm28662-201ENSMUST00000188446 695 ntBASIC15.25■□□□□ 0.03
Chmp7Q8R1T1 Gm28251-201ENSMUST00000188835 695 ntBASIC15.25■□□□□ 0.03
Chmp7Q8R1T1 Gm37318-201ENSMUST00000194325 695 ntBASIC15.25■□□□□ 0.03
Chmp7Q8R1T1 Gm38017-201ENSMUST00000194768 695 ntBASIC15.25■□□□□ 0.03
Chmp7Q8R1T1 Gm37287-201ENSMUST00000195449 695 ntBASIC15.25■□□□□ 0.03
Chmp7Q8R1T1 Gm37793-201ENSMUST00000195548 695 ntBASIC15.25■□□□□ 0.03
Chmp7Q8R1T1 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC15.25■□□□□ 0.03
Chmp7Q8R1T1 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC15.25■□□□□ 0.03
Chmp7Q8R1T1 CT025551.1-201ENSMUST00000223996 692 ntBASIC15.25■□□□□ 0.03
Chmp7Q8R1T1 AC165260.2-203ENSMUST00000224237 336 ntBASIC15.25■□□□□ 0.03
Chmp7Q8R1T1 Tbca-201ENSMUST00000046644 559 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Chmp7Q8R1T1 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Chmp7Q8R1T1 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Chmp7Q8R1T1 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Chmp7Q8R1T1 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Chmp7Q8R1T1 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Chmp7Q8R1T1 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Chmp7Q8R1T1 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Chmp7Q8R1T1 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Chmp7Q8R1T1 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC15.25■□□□□ 0.03
Chmp7Q8R1T1 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Chmp7Q8R1T1 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Chmp7Q8R1T1 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Chmp7Q8R1T1 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Chmp7Q8R1T1 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC15.25■□□□□ 0.03
Chmp7Q8R1T1 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Chmp7Q8R1T1 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Chmp7Q8R1T1 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Chmp7Q8R1T1 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Chmp7Q8R1T1 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Chmp7Q8R1T1 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chmp7Q8R1T1 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Chmp7Q8R1T1 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Chmp7Q8R1T1 AC166836.1-201ENSMUST00000219933 1795 ntBASIC15.24■□□□□ 0.03
Chmp7Q8R1T1 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Chmp7Q8R1T1 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chmp7Q8R1T1 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chmp7Q8R1T1 Gm38385-201ENSMUST00000194454 2351 ntBASIC15.24■□□□□ 0.03
Chmp7Q8R1T1 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chmp7Q8R1T1 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chmp7Q8R1T1 Mir1956-201ENSMUST00000157748 65 ntBASIC15.24■□□□□ 0.03
Chmp7Q8R1T1 Ptbp2-210ENSMUST00000198403 389 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Chmp7Q8R1T1 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Chmp7Q8R1T1 AC124433.1-201ENSMUST00000224483 1063 ntBASIC15.24■□□□□ 0.03
Chmp7Q8R1T1 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chmp7Q8R1T1 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chmp7Q8R1T1 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Chmp7Q8R1T1 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Chmp7Q8R1T1 Map1b-203ENSMUST00000223725 2669 ntBASIC15.24■□□□□ 0.03
Chmp7Q8R1T1 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chmp7Q8R1T1 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chmp7Q8R1T1 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chmp7Q8R1T1 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Chmp7Q8R1T1 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC15.24■□□□□ 0.03
Chmp7Q8R1T1 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chmp7Q8R1T1 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chmp7Q8R1T1 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chmp7Q8R1T1 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chmp7Q8R1T1 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Chmp7Q8R1T1 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC15.23■□□□□ 0.03
Chmp7Q8R1T1 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC15.23■□□□□ 0.03
Chmp7Q8R1T1 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chmp7Q8R1T1 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chmp7Q8R1T1 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chmp7Q8R1T1 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Chmp7Q8R1T1 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chmp7Q8R1T1 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Chmp7Q8R1T1 Pcnp-203ENSMUST00000119981 901 ntTSL 3 BASIC15.23■□□□□ 0.03
Chmp7Q8R1T1 Gm13323-201ENSMUST00000120245 1151 ntBASIC15.23■□□□□ 0.03
Chmp7Q8R1T1 Gm4879-201ENSMUST00000122190 1272 ntBASIC15.23■□□□□ 0.03
Chmp7Q8R1T1 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC15.23■□□□□ 0.03
Chmp7Q8R1T1 Gm20714-202ENSMUST00000176436 748 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Chmp7Q8R1T1 Gm28388-201ENSMUST00000186262 437 ntBASIC15.23■□□□□ 0.03
Chmp7Q8R1T1 Gm37458-201ENSMUST00000194055 410 ntBASIC15.23■□□□□ 0.03
Chmp7Q8R1T1 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Chmp7Q8R1T1 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms