Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Clip4Q8CI96 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Clip4Q8CI96 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Clip4Q8CI96 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Clip4Q8CI96 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Clip4Q8CI96 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Clip4Q8CI96 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Clip4Q8CI96 Gm17230-201ENSMUST00000171194 3942 ntBASIC12.05□□□□□ -0.48
Clip4Q8CI96 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Clip4Q8CI96 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Clip4Q8CI96 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Clip4Q8CI96 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Clip4Q8CI96 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Clip4Q8CI96 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Clip4Q8CI96 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Clip4Q8CI96 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC12.05□□□□□ -0.48
Clip4Q8CI96 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Clip4Q8CI96 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC12.05□□□□□ -0.48
Clip4Q8CI96 Gm24830-201ENSMUST00000102024 166 ntBASIC12.05□□□□□ -0.48
Clip4Q8CI96 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Clip4Q8CI96 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC12.05□□□□□ -0.48
Clip4Q8CI96 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC12.05□□□□□ -0.48
Clip4Q8CI96 Gm14109-201ENSMUST00000118814 309 ntBASIC12.05□□□□□ -0.48
Clip4Q8CI96 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC12.05□□□□□ -0.48
Clip4Q8CI96 Gm14832-201ENSMUST00000121289 322 ntBASIC12.05□□□□□ -0.48
Clip4Q8CI96 Gm12715-201ENSMUST00000121430 1128 ntBASIC12.05□□□□□ -0.48
Clip4Q8CI96 Gm24845-201ENSMUST00000158034 109 ntBASIC12.05□□□□□ -0.48
Clip4Q8CI96 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Clip4Q8CI96 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC12.05□□□□□ -0.48
Clip4Q8CI96 Gm25890-201ENSMUST00000177643 165 ntBASIC12.05□□□□□ -0.48
Clip4Q8CI96 Rnu1b2-201ENSMUST00000178073 165 ntBASIC12.05□□□□□ -0.48
Clip4Q8CI96 Gm8494-201ENSMUST00000178171 1233 ntBASIC12.05□□□□□ -0.48
Clip4Q8CI96 Rnu1b1-201ENSMUST00000178250 165 ntBASIC12.05□□□□□ -0.48
Clip4Q8CI96 Gm22614-201ENSMUST00000178300 165 ntBASIC12.05□□□□□ -0.48
Clip4Q8CI96 Gm9022-201ENSMUST00000182482 992 ntBASIC12.05□□□□□ -0.48
Clip4Q8CI96 Gm18304-201ENSMUST00000189162 546 ntBASIC12.05□□□□□ -0.48
Clip4Q8CI96 Gm8885-201ENSMUST00000189382 598 ntBASIC12.05□□□□□ -0.48
Clip4Q8CI96 Gm38317-201ENSMUST00000195564 343 ntBASIC12.05□□□□□ -0.48
Clip4Q8CI96 Ighv1-60-201ENSMUST00000195816 405 ntBASIC12.05□□□□□ -0.48
Clip4Q8CI96 AC098716.1-201ENSMUST00000213527 703 ntBASIC12.05□□□□□ -0.48
Clip4Q8CI96 AC154222.2-201ENSMUST00000225848 607 ntBASIC12.05□□□□□ -0.48
Clip4Q8CI96 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Clip4Q8CI96 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Clip4Q8CI96 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Clip4Q8CI96 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Clip4Q8CI96 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Clip4Q8CI96 Gm22042-201ENSMUST00000082989 165 ntBASIC12.05□□□□□ -0.48
Clip4Q8CI96 Gm26232-201ENSMUST00000083360 166 ntBASIC12.05□□□□□ -0.48
Clip4Q8CI96 Gm24136-201ENSMUST00000083374 165 ntBASIC12.05□□□□□ -0.48
Clip4Q8CI96 Rnu1b6-201ENSMUST00000083839 166 ntBASIC12.05□□□□□ -0.48
Clip4Q8CI96 Gm26110-201ENSMUST00000083971 165 ntBASIC12.05□□□□□ -0.48
Clip4Q8CI96 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Clip4Q8CI96 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Clip4Q8CI96 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Clip4Q8CI96 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Clip4Q8CI96 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Clip4Q8CI96 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Clip4Q8CI96 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Clip4Q8CI96 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC12.05□□□□□ -0.48
Clip4Q8CI96 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Clip4Q8CI96 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC12.05□□□□□ -0.48
Clip4Q8CI96 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC12.05□□□□□ -0.48
Clip4Q8CI96 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Clip4Q8CI96 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Clip4Q8CI96 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Clip4Q8CI96 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Clip4Q8CI96 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Clip4Q8CI96 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Clip4Q8CI96 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC12.05□□□□□ -0.48
Clip4Q8CI96 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Clip4Q8CI96 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Clip4Q8CI96 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Clip4Q8CI96 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC12.04□□□□□ -0.48
Clip4Q8CI96 AC130671.2-201ENSMUST00000227224 1621 ntBASIC12.04□□□□□ -0.48
Clip4Q8CI96 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
Clip4Q8CI96 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
Clip4Q8CI96 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Clip4Q8CI96 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Clip4Q8CI96 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Clip4Q8CI96 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Clip4Q8CI96 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Clip4Q8CI96 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Clip4Q8CI96 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Clip4Q8CI96 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Clip4Q8CI96 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Clip4Q8CI96 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Clip4Q8CI96 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Clip4Q8CI96 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Clip4Q8CI96 Gm15276-201ENSMUST00000145953 498 ntBASIC12.04□□□□□ -0.48
Clip4Q8CI96 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Clip4Q8CI96 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Clip4Q8CI96 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Clip4Q8CI96 Gm4819-201ENSMUST00000182170 1009 ntBASIC12.04□□□□□ -0.48
Clip4Q8CI96 Gm42599-201ENSMUST00000201308 469 ntBASIC12.04□□□□□ -0.48
Clip4Q8CI96 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC12.04□□□□□ -0.48
Clip4Q8CI96 AC093022.1-201ENSMUST00000226949 1072 ntBASIC12.04□□□□□ -0.48
Clip4Q8CI96 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Clip4Q8CI96 Rassf8-202ENSMUST00000058538 1131 ntBASIC12.04□□□□□ -0.48
Clip4Q8CI96 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Clip4Q8CI96 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms