Protein–RNA interactions for Protein: Q8CCS6

Pabpn1, Polyadenylate-binding protein 2, mousemouse

Known RBP Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpn1Q8CCS6 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pabpn1Q8CCS6 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pabpn1Q8CCS6 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Pabpn1Q8CCS6 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pabpn1Q8CCS6 Sertad3-201ENSMUST00000068641 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pabpn1Q8CCS6 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Pabpn1Q8CCS6 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pabpn1Q8CCS6 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pabpn1Q8CCS6 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pabpn1Q8CCS6 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Pabpn1Q8CCS6 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pabpn1Q8CCS6 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Pabpn1Q8CCS6 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Pabpn1Q8CCS6 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pabpn1Q8CCS6 Ap5s1-203ENSMUST00000110208 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pabpn1Q8CCS6 Micu1-212ENSMUST00000179709 1814 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pabpn1Q8CCS6 2300003K06Rik-201ENSMUST00000105054 1265 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Pabpn1Q8CCS6 Zfand1-202ENSMUST00000108377 936 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Pabpn1Q8CCS6 Gm4034-201ENSMUST00000187674 480 ntBASIC18.15■□□□□ 0.5
Pabpn1Q8CCS6 Gm45584-201ENSMUST00000211586 1143 ntTSL 5 BASIC18.15■□□□□ 0.5
Pabpn1Q8CCS6 Pbp2-201ENSMUST00000050471 1279 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Pabpn1Q8CCS6 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pabpn1Q8CCS6 Rps4l-ps-201ENSMUST00000059737 768 ntBASIC18.15■□□□□ 0.5
Pabpn1Q8CCS6 Gm6560-201ENSMUST00000198588 1591 ntBASIC18.15■□□□□ 0.5
Pabpn1Q8CCS6 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Pabpn1Q8CCS6 Ccr6-205ENSMUST00000177568 1334 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pabpn1Q8CCS6 4921513H07Rik-201ENSMUST00000201403 2238 ntBASIC18.15■□□□□ 0.5
Pabpn1Q8CCS6 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pabpn1Q8CCS6 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC18.15■□□□□ 0.5
Pabpn1Q8CCS6 Ccdc78-201ENSMUST00000095500 1651 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Pabpn1Q8CCS6 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pabpn1Q8CCS6 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Pabpn1Q8CCS6 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pabpn1Q8CCS6 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC18.15■□□□□ 0.5
Pabpn1Q8CCS6 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Pabpn1Q8CCS6 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Pabpn1Q8CCS6 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.5
Pabpn1Q8CCS6 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Pabpn1Q8CCS6 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC18.14■□□□□ 0.5
Pabpn1Q8CCS6 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Pabpn1Q8CCS6 Tekt2-202ENSMUST00000102616 1542 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Pabpn1Q8CCS6 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pabpn1Q8CCS6 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC18.14■□□□□ 0.49
Pabpn1Q8CCS6 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pabpn1Q8CCS6 Fthl17-ps2-201ENSMUST00000122268 528 ntBASIC18.14■□□□□ 0.49
Pabpn1Q8CCS6 Gm25288-201ENSMUST00000122800 265 ntBASIC18.14■□□□□ 0.49
Pabpn1Q8CCS6 Gm12273-201ENSMUST00000137418 1084 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Pabpn1Q8CCS6 Gm12056-201ENSMUST00000148364 1257 ntTSL 5 BASIC18.14■□□□□ 0.49
Pabpn1Q8CCS6 Gm6946-201ENSMUST00000182237 987 ntBASIC18.14■□□□□ 0.49
Pabpn1Q8CCS6 Gm37009-201ENSMUST00000193297 361 ntBASIC18.14■□□□□ 0.49
Pabpn1Q8CCS6 Gm43460-201ENSMUST00000202491 1057 ntBASIC18.14■□□□□ 0.49
Pabpn1Q8CCS6 Gm36176-201ENSMUST00000218749 501 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Pabpn1Q8CCS6 Gm7727-201ENSMUST00000219830 671 ntBASIC18.14■□□□□ 0.49
Pabpn1Q8CCS6 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pabpn1Q8CCS6 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Pabpn1Q8CCS6 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC18.14■□□□□ 0.49
Pabpn1Q8CCS6 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Pabpn1Q8CCS6 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pabpn1Q8CCS6 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC18.14■□□□□ 0.49
Pabpn1Q8CCS6 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pabpn1Q8CCS6 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pabpn1Q8CCS6 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Pabpn1Q8CCS6 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pabpn1Q8CCS6 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pabpn1Q8CCS6 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Pabpn1Q8CCS6 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pabpn1Q8CCS6 Gm5159-201ENSMUST00000212733 1652 ntBASIC18.13■□□□□ 0.49
Pabpn1Q8CCS6 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
Pabpn1Q8CCS6 Zscan21-201ENSMUST00000062350 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pabpn1Q8CCS6 Vmn2r-ps125-201ENSMUST00000176234 931 ntBASIC18.13■□□□□ 0.49
Pabpn1Q8CCS6 Gm29067-201ENSMUST00000190821 470 ntBASIC18.13■□□□□ 0.49
Pabpn1Q8CCS6 Gm9523-201ENSMUST00000199146 1159 ntBASIC18.13■□□□□ 0.49
Pabpn1Q8CCS6 Fxyd7-202ENSMUST00000206341 620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pabpn1Q8CCS6 AC107711.3-201ENSMUST00000228939 1035 ntBASIC18.13■□□□□ 0.49
Pabpn1Q8CCS6 Fxyd7-201ENSMUST00000073892 693 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pabpn1Q8CCS6 Ccl27a-201ENSMUST00000074387 405 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pabpn1Q8CCS6 Gm7589-201ENSMUST00000085631 534 ntBASIC18.13■□□□□ 0.49
Pabpn1Q8CCS6 Hist1h2bl-201ENSMUST00000091756 381 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Pabpn1Q8CCS6 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pabpn1Q8CCS6 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pabpn1Q8CCS6 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Pabpn1Q8CCS6 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pabpn1Q8CCS6 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pabpn1Q8CCS6 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Pabpn1Q8CCS6 Smco1-201ENSMUST00000093183 1408 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Pabpn1Q8CCS6 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pabpn1Q8CCS6 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pabpn1Q8CCS6 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
Pabpn1Q8CCS6 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Pabpn1Q8CCS6 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Pabpn1Q8CCS6 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Pabpn1Q8CCS6 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pabpn1Q8CCS6 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pabpn1Q8CCS6 Prim2-201ENSMUST00000027312 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pabpn1Q8CCS6 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pabpn1Q8CCS6 Rufy2-204ENSMUST00000131718 2816 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Pabpn1Q8CCS6 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pabpn1Q8CCS6 Gm8111-201ENSMUST00000117659 987 ntBASIC18.12■□□□□ 0.49
Pabpn1Q8CCS6 Gm6441-201ENSMUST00000120983 696 ntBASIC18.12■□□□□ 0.49
Pabpn1Q8CCS6 Gm12426-201ENSMUST00000153083 371 ntTSL 5 BASIC18.12■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms