Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Alx1Q8C8B0 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Alx1Q8C8B0 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Alx1Q8C8B0 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Alx1Q8C8B0 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
Alx1Q8C8B0 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Alx1Q8C8B0 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Alx1Q8C8B0 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Alx1Q8C8B0 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC13.9□□□□□ -0.18
Alx1Q8C8B0 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Alx1Q8C8B0 Gm6397-201ENSMUST00000161973 1069 ntBASIC13.9□□□□□ -0.18
Alx1Q8C8B0 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Alx1Q8C8B0 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC13.9□□□□□ -0.18
Alx1Q8C8B0 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC13.9□□□□□ -0.18
Alx1Q8C8B0 Gm37246-201ENSMUST00000192665 835 ntBASIC13.9□□□□□ -0.18
Alx1Q8C8B0 Gm37835-201ENSMUST00000193305 361 ntBASIC13.9□□□□□ -0.18
Alx1Q8C8B0 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC13.9□□□□□ -0.18
Alx1Q8C8B0 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Alx1Q8C8B0 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC13.9□□□□□ -0.18
Alx1Q8C8B0 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC13.9□□□□□ -0.18
Alx1Q8C8B0 Ntng1-201ENSMUST00000051253 327 ntBASIC13.9□□□□□ -0.18
Alx1Q8C8B0 Gm7551-201ENSMUST00000089593 1074 ntBASIC13.9□□□□□ -0.18
Alx1Q8C8B0 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Alx1Q8C8B0 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC13.9□□□□□ -0.18
Alx1Q8C8B0 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Alx1Q8C8B0 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Alx1Q8C8B0 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Alx1Q8C8B0 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Alx1Q8C8B0 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Alx1Q8C8B0 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
Alx1Q8C8B0 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Alx1Q8C8B0 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Alx1Q8C8B0 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Alx1Q8C8B0 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Alx1Q8C8B0 Gm18986-201ENSMUST00000216029 1986 ntBASIC13.89□□□□□ -0.19
Alx1Q8C8B0 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Alx1Q8C8B0 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Alx1Q8C8B0 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Alx1Q8C8B0 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Alx1Q8C8B0 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Alx1Q8C8B0 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC13.89□□□□□ -0.19
Alx1Q8C8B0 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Alx1Q8C8B0 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Alx1Q8C8B0 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Alx1Q8C8B0 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Alx1Q8C8B0 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Alx1Q8C8B0 Gm13916-201ENSMUST00000117368 628 ntBASIC13.89□□□□□ -0.19
Alx1Q8C8B0 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC13.89□□□□□ -0.19
Alx1Q8C8B0 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC13.89□□□□□ -0.19
Alx1Q8C8B0 Mir5132-201ENSMUST00000175166 71 ntBASIC13.89□□□□□ -0.19
Alx1Q8C8B0 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
Alx1Q8C8B0 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC13.89□□□□□ -0.19
Alx1Q8C8B0 Gm19353-201ENSMUST00000184561 445 ntBASIC13.89□□□□□ -0.19
Alx1Q8C8B0 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC13.89□□□□□ -0.19
Alx1Q8C8B0 Gm9540-201ENSMUST00000188230 478 ntBASIC13.89□□□□□ -0.19
Alx1Q8C8B0 Gm18827-201ENSMUST00000188341 790 ntBASIC13.89□□□□□ -0.19
Alx1Q8C8B0 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Alx1Q8C8B0 Gm6905-201ENSMUST00000205729 511 ntBASIC13.89□□□□□ -0.19
Alx1Q8C8B0 AC112945.1-201ENSMUST00000226413 514 ntBASIC13.89□□□□□ -0.19
Alx1Q8C8B0 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Alx1Q8C8B0 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Alx1Q8C8B0 Ptprm-203ENSMUST00000224091 3773 ntBASIC13.89□□□□□ -0.19
Alx1Q8C8B0 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Alx1Q8C8B0 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Alx1Q8C8B0 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Alx1Q8C8B0 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Alx1Q8C8B0 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Alx1Q8C8B0 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Alx1Q8C8B0 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Alx1Q8C8B0 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Alx1Q8C8B0 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Alx1Q8C8B0 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Alx1Q8C8B0 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Alx1Q8C8B0 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Alx1Q8C8B0 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Alx1Q8C8B0 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC13.88□□□□□ -0.19
Alx1Q8C8B0 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Alx1Q8C8B0 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Alx1Q8C8B0 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Alx1Q8C8B0 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Alx1Q8C8B0 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Alx1Q8C8B0 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Alx1Q8C8B0 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Alx1Q8C8B0 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Alx1Q8C8B0 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Alx1Q8C8B0 Gm12165-201ENSMUST00000117047 342 ntBASIC13.88□□□□□ -0.19
Alx1Q8C8B0 Gm8731-201ENSMUST00000118088 412 ntBASIC13.88□□□□□ -0.19
Alx1Q8C8B0 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Alx1Q8C8B0 Gm23699-201ENSMUST00000158835 135 ntBASIC13.88□□□□□ -0.19
Alx1Q8C8B0 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
Alx1Q8C8B0 Gm5732-201ENSMUST00000182596 1007 ntBASIC13.88□□□□□ -0.19
Alx1Q8C8B0 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC13.88□□□□□ -0.19
Alx1Q8C8B0 Gm38151-201ENSMUST00000195085 289 ntBASIC13.88□□□□□ -0.19
Alx1Q8C8B0 Gm9555-201ENSMUST00000200908 583 ntBASIC13.88□□□□□ -0.19
Alx1Q8C8B0 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC13.88□□□□□ -0.19
Alx1Q8C8B0 Spcs1-203ENSMUST00000226374 592 ntBASIC13.88□□□□□ -0.19
Alx1Q8C8B0 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Alx1Q8C8B0 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Alx1Q8C8B0 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Alx1Q8C8B0 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 75.2 ms