Protein–RNA interactions for Protein: Q8BP27

Sfr1, Swi5-dependent recombination DNA repair protein 1 homolog, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sfr1Q8BP27 Gm37447-201ENSMUST00000195625 2928 ntBASIC12.25□□□□□ -0.45
Sfr1Q8BP27 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC12.25□□□□□ -0.45
Sfr1Q8BP27 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Sfr1Q8BP27 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sfr1Q8BP27 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC12.25□□□□□ -0.45
Sfr1Q8BP27 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sfr1Q8BP27 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC12.25□□□□□ -0.45
Sfr1Q8BP27 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC12.25□□□□□ -0.45
Sfr1Q8BP27 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Sfr1Q8BP27 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sfr1Q8BP27 Ccdc63-201ENSMUST00000058960 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sfr1Q8BP27 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sfr1Q8BP27 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sfr1Q8BP27 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sfr1Q8BP27 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Sfr1Q8BP27 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sfr1Q8BP27 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sfr1Q8BP27 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sfr1Q8BP27 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sfr1Q8BP27 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Sfr1Q8BP27 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sfr1Q8BP27 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Sfr1Q8BP27 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
Sfr1Q8BP27 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sfr1Q8BP27 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sfr1Q8BP27 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sfr1Q8BP27 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sfr1Q8BP27 Gm13996-201ENSMUST00000118456 430 ntBASIC12.24□□□□□ -0.45
Sfr1Q8BP27 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Sfr1Q8BP27 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Sfr1Q8BP27 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC12.24□□□□□ -0.45
Sfr1Q8BP27 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Sfr1Q8BP27 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC12.24□□□□□ -0.45
Sfr1Q8BP27 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC12.24□□□□□ -0.45
Sfr1Q8BP27 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC12.24□□□□□ -0.45
Sfr1Q8BP27 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC12.24□□□□□ -0.45
Sfr1Q8BP27 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sfr1Q8BP27 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC12.24□□□□□ -0.45
Sfr1Q8BP27 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Sfr1Q8BP27 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC12.24□□□□□ -0.45
Sfr1Q8BP27 Gm27390-201ENSMUST00000184516 176 ntBASIC12.24□□□□□ -0.45
Sfr1Q8BP27 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC12.24□□□□□ -0.45
Sfr1Q8BP27 Gm6124-201ENSMUST00000188240 2580 ntBASIC12.24□□□□□ -0.45
Sfr1Q8BP27 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Sfr1Q8BP27 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Sfr1Q8BP27 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sfr1Q8BP27 Gm9176-201ENSMUST00000219955 1120 ntBASIC12.24□□□□□ -0.45
Sfr1Q8BP27 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sfr1Q8BP27 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC12.24□□□□□ -0.45
Sfr1Q8BP27 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sfr1Q8BP27 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sfr1Q8BP27 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sfr1Q8BP27 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Sfr1Q8BP27 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sfr1Q8BP27 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Sfr1Q8BP27 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sfr1Q8BP27 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sfr1Q8BP27 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sfr1Q8BP27 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sfr1Q8BP27 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Sfr1Q8BP27 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
Sfr1Q8BP27 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Sfr1Q8BP27 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Sfr1Q8BP27 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sfr1Q8BP27 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC12.24□□□□□ -0.45
Sfr1Q8BP27 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Sfr1Q8BP27 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Sfr1Q8BP27 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sfr1Q8BP27 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sfr1Q8BP27 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Sfr1Q8BP27 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Sfr1Q8BP27 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sfr1Q8BP27 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sfr1Q8BP27 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Sfr1Q8BP27 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sfr1Q8BP27 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Sfr1Q8BP27 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sfr1Q8BP27 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Sfr1Q8BP27 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC12.23□□□□□ -0.45
Sfr1Q8BP27 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sfr1Q8BP27 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sfr1Q8BP27 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC12.23□□□□□ -0.45
Sfr1Q8BP27 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC12.23□□□□□ -0.45
Sfr1Q8BP27 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sfr1Q8BP27 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC12.23□□□□□ -0.45
Sfr1Q8BP27 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Sfr1Q8BP27 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Sfr1Q8BP27 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Sfr1Q8BP27 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Sfr1Q8BP27 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Sfr1Q8BP27 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC12.23□□□□□ -0.45
Sfr1Q8BP27 AC093022.1-201ENSMUST00000226949 1072 ntBASIC12.23□□□□□ -0.45
Sfr1Q8BP27 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sfr1Q8BP27 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sfr1Q8BP27 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Sfr1Q8BP27 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sfr1Q8BP27 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC12.23□□□□□ -0.45
Sfr1Q8BP27 Vezt-202ENSMUST00000118077 2223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sfr1Q8BP27 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Sfr1Q8BP27 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms