Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Scn9aQ62205 Gm19692-201ENSMUST00000203856 2084 ntBASIC13.81□□□□□ -0.2
Scn9aQ62205 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Scn9aQ62205 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Scn9aQ62205 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Scn9aQ62205 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Scn9aQ62205 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Scn9aQ62205 Gm12159-201ENSMUST00000143869 1447 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Scn9aQ62205 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Scn9aQ62205 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Scn9aQ62205 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Scn9aQ62205 Gm14255-201ENSMUST00000128846 248 ntTSL 5 BASIC13.81□□□□□ -0.2
Scn9aQ62205 Gm15911-201ENSMUST00000138992 809 ntTSL 3 BASIC13.81□□□□□ -0.2
Scn9aQ62205 Gm10631-201ENSMUST00000153288 494 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Scn9aQ62205 Mir432-201ENSMUST00000157230 75 ntBASIC13.81□□□□□ -0.2
Scn9aQ62205 Gm7069-201ENSMUST00000182418 1008 ntBASIC13.81□□□□□ -0.2
Scn9aQ62205 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Scn9aQ62205 E230014E18Rik-201ENSMUST00000215920 859 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Scn9aQ62205 Gm9487-201ENSMUST00000216600 472 ntBASIC13.81□□□□□ -0.2
Scn9aQ62205 D730050B12Rik-201ENSMUST00000223149 585 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Scn9aQ62205 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Scn9aQ62205 Gm45012-201ENSMUST00000208323 1666 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Scn9aQ62205 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Scn9aQ62205 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Scn9aQ62205 Ccndbp1-202ENSMUST00000099488 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Scn9aQ62205 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC13.81□□□□□ -0.2
Scn9aQ62205 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Scn9aQ62205 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Scn9aQ62205 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Scn9aQ62205 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Scn9aQ62205 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC13.8□□□□□ -0.2
Scn9aQ62205 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Scn9aQ62205 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Scn9aQ62205 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Scn9aQ62205 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Scn9aQ62205 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Scn9aQ62205 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Scn9aQ62205 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Scn9aQ62205 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC13.8□□□□□ -0.2
Scn9aQ62205 Tnfrsf14-201ENSMUST00000123514 1018 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Scn9aQ62205 Gm11417-201ENSMUST00000150536 920 ntTSL 2 BASIC13.8□□□□□ -0.2
Scn9aQ62205 Scgb2b7-201ENSMUST00000178258 520 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Scn9aQ62205 4930578M01Rik-201ENSMUST00000180490 907 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Scn9aQ62205 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Scn9aQ62205 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
Scn9aQ62205 AC134248.1-201ENSMUST00000216113 1176 ntBASIC13.8□□□□□ -0.2
Scn9aQ62205 AC170597.1-201ENSMUST00000221956 440 ntTSL 2 BASIC13.8□□□□□ -0.2
Scn9aQ62205 Gm8181-201ENSMUST00000062242 669 ntBASIC13.8□□□□□ -0.2
Scn9aQ62205 Krtap4-1-201ENSMUST00000081007 1015 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Scn9aQ62205 Gm5449-201ENSMUST00000081132 357 ntBASIC13.8□□□□□ -0.2
Scn9aQ62205 Defa3-201ENSMUST00000098893 410 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Scn9aQ62205 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
Scn9aQ62205 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Scn9aQ62205 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Scn9aQ62205 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Scn9aQ62205 Rab3c-202ENSMUST00000223922 2398 ntBASIC13.8□□□□□ -0.2
Scn9aQ62205 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Scn9aQ62205 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Scn9aQ62205 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Scn9aQ62205 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Scn9aQ62205 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Scn9aQ62205 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Scn9aQ62205 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Scn9aQ62205 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Scn9aQ62205 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Scn9aQ62205 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Scn9aQ62205 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Scn9aQ62205 Gm38344-201ENSMUST00000195306 1353 ntBASIC13.8□□□□□ -0.2
Scn9aQ62205 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Scn9aQ62205 Gm37019-201ENSMUST00000192133 2134 ntBASIC13.8□□□□□ -0.2
Scn9aQ62205 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Scn9aQ62205 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Scn9aQ62205 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Scn9aQ62205 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Scn9aQ62205 Gm23255-201ENSMUST00000102244 110 ntBASIC13.8□□□□□ -0.2
Scn9aQ62205 Gm12247-201ENSMUST00000117585 670 ntBASIC13.8□□□□□ -0.2
Scn9aQ62205 Gm14071-201ENSMUST00000117817 509 ntBASIC13.8□□□□□ -0.2
Scn9aQ62205 D3Ertd751e-204ENSMUST00000119572 1011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Scn9aQ62205 Gm12681-201ENSMUST00000132337 700 ntTSL 3 BASIC13.8□□□□□ -0.2
Scn9aQ62205 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC13.8□□□□□ -0.2
Scn9aQ62205 Gm30731-201ENSMUST00000203909 825 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Scn9aQ62205 Gm45527-201ENSMUST00000211052 774 ntBASIC13.8□□□□□ -0.2
Scn9aQ62205 AC122860.1-201ENSMUST00000217669 773 ntTSL 3 BASIC13.8□□□□□ -0.2
Scn9aQ62205 AC123694.1-201ENSMUST00000219525 644 ntTSL 5 BASIC13.8□□□□□ -0.2
Scn9aQ62205 Crygf-201ENSMUST00000027082 627 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Scn9aQ62205 Mustn1-201ENSMUST00000040715 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Scn9aQ62205 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Scn9aQ62205 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Scn9aQ62205 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Scn9aQ62205 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Scn9aQ62205 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Scn9aQ62205 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Scn9aQ62205 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Scn9aQ62205 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC13.79□□□□□ -0.2
Scn9aQ62205 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Scn9aQ62205 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Scn9aQ62205 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Scn9aQ62205 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Scn9aQ62205 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Scn9aQ62205 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC13.79□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 62 ms