Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
ClpbQ60649 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
ClpbQ60649 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
ClpbQ60649 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC11.5□□□□□ -0.57
ClpbQ60649 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
ClpbQ60649 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC11.5□□□□□ -0.57
ClpbQ60649 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
ClpbQ60649 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
ClpbQ60649 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
ClpbQ60649 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
ClpbQ60649 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
ClpbQ60649 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
ClpbQ60649 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
ClpbQ60649 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
ClpbQ60649 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
ClpbQ60649 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
ClpbQ60649 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
ClpbQ60649 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC11.49□□□□□ -0.57
ClpbQ60649 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
ClpbQ60649 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC11.49□□□□□ -0.57
ClpbQ60649 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
ClpbQ60649 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
ClpbQ60649 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
ClpbQ60649 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC11.49□□□□□ -0.57
ClpbQ60649 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
ClpbQ60649 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
ClpbQ60649 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC11.49□□□□□ -0.57
ClpbQ60649 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC11.49□□□□□ -0.57
ClpbQ60649 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC11.49□□□□□ -0.57
ClpbQ60649 Gm12997-201ENSMUST00000120207 640 ntBASIC11.49□□□□□ -0.57
ClpbQ60649 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
ClpbQ60649 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC11.49□□□□□ -0.57
ClpbQ60649 Gm7619-201ENSMUST00000210649 1282 ntBASIC11.49□□□□□ -0.57
ClpbQ60649 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
ClpbQ60649 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC11.49□□□□□ -0.57
ClpbQ60649 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC11.49□□□□□ -0.57
ClpbQ60649 AC163667.3-201ENSMUST00000225774 222 ntBASIC11.49□□□□□ -0.57
ClpbQ60649 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
ClpbQ60649 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
ClpbQ60649 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
ClpbQ60649 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC11.49□□□□□ -0.57
ClpbQ60649 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
ClpbQ60649 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
ClpbQ60649 Gm37513-201ENSMUST00000194830 2268 ntBASIC11.49□□□□□ -0.57
ClpbQ60649 Gm38378-201ENSMUST00000195153 2268 ntBASIC11.49□□□□□ -0.57
ClpbQ60649 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
ClpbQ60649 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
ClpbQ60649 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
ClpbQ60649 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
ClpbQ60649 Gm7537-201ENSMUST00000221660 1414 ntBASIC11.49□□□□□ -0.57
ClpbQ60649 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
ClpbQ60649 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC11.49□□□□□ -0.57
ClpbQ60649 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC11.49□□□□□ -0.57
ClpbQ60649 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
ClpbQ60649 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
ClpbQ60649 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
ClpbQ60649 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
ClpbQ60649 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
ClpbQ60649 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
ClpbQ60649 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
ClpbQ60649 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC11.49□□□□□ -0.57
ClpbQ60649 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
ClpbQ60649 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC11.49□□□□□ -0.57
ClpbQ60649 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
ClpbQ60649 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC11.48□□□□□ -0.57
ClpbQ60649 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC11.48□□□□□ -0.57
ClpbQ60649 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
ClpbQ60649 Gm37014-201ENSMUST00000194723 2253 ntBASIC11.48□□□□□ -0.57
ClpbQ60649 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
ClpbQ60649 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
ClpbQ60649 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
ClpbQ60649 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
ClpbQ60649 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
ClpbQ60649 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
ClpbQ60649 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
ClpbQ60649 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
ClpbQ60649 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
ClpbQ60649 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC11.48□□□□□ -0.57
ClpbQ60649 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
ClpbQ60649 Gm14277-201ENSMUST00000121195 360 ntBASIC11.48□□□□□ -0.57
ClpbQ60649 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
ClpbQ60649 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
ClpbQ60649 Gm44262-201ENSMUST00000204969 372 ntBASIC11.48□□□□□ -0.57
ClpbQ60649 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC11.48□□□□□ -0.57
ClpbQ60649 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC11.48□□□□□ -0.57
ClpbQ60649 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC11.48□□□□□ -0.57
ClpbQ60649 Mettl6-204ENSMUST00000227595 1027 ntBASIC11.48□□□□□ -0.57
ClpbQ60649 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
ClpbQ60649 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
ClpbQ60649 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
ClpbQ60649 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
ClpbQ60649 Crry-ps-201ENSMUST00000079090 1309 ntBASIC11.48□□□□□ -0.57
ClpbQ60649 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
ClpbQ60649 AC113441.2-201ENSMUST00000221538 1468 ntBASIC11.48□□□□□ -0.57
ClpbQ60649 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC11.48□□□□□ -0.57
ClpbQ60649 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
ClpbQ60649 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
ClpbQ60649 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
ClpbQ60649 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC11.48□□□□□ -0.57
ClpbQ60649 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms