Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Syne3Q4FZC9 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Syne3Q4FZC9 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Syne3Q4FZC9 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC12.7□□□□□ -0.38
Syne3Q4FZC9 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC12.7□□□□□ -0.38
Syne3Q4FZC9 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Syne3Q4FZC9 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Syne3Q4FZC9 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
Syne3Q4FZC9 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Syne3Q4FZC9 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Syne3Q4FZC9 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Syne3Q4FZC9 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Syne3Q4FZC9 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Syne3Q4FZC9 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Syne3Q4FZC9 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Syne3Q4FZC9 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Syne3Q4FZC9 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Syne3Q4FZC9 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Syne3Q4FZC9 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Syne3Q4FZC9 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC12.7□□□□□ -0.38
Syne3Q4FZC9 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Syne3Q4FZC9 Gm5070-201ENSMUST00000177599 862 ntBASIC12.7□□□□□ -0.38
Syne3Q4FZC9 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Syne3Q4FZC9 Gm9230-201ENSMUST00000188228 532 ntBASIC12.7□□□□□ -0.38
Syne3Q4FZC9 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC12.7□□□□□ -0.38
Syne3Q4FZC9 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Syne3Q4FZC9 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Syne3Q4FZC9 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Syne3Q4FZC9 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC12.7□□□□□ -0.38
Syne3Q4FZC9 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC12.7□□□□□ -0.38
Syne3Q4FZC9 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Syne3Q4FZC9 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Syne3Q4FZC9 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Syne3Q4FZC9 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Syne3Q4FZC9 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Syne3Q4FZC9 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC12.7□□□□□ -0.38
Syne3Q4FZC9 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Syne3Q4FZC9 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC12.7□□□□□ -0.38
Syne3Q4FZC9 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC12.7□□□□□ -0.38
Syne3Q4FZC9 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Syne3Q4FZC9 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Syne3Q4FZC9 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC12.69□□□□□ -0.38
Syne3Q4FZC9 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Syne3Q4FZC9 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC12.69□□□□□ -0.38
Syne3Q4FZC9 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Syne3Q4FZC9 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
Syne3Q4FZC9 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Syne3Q4FZC9 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Syne3Q4FZC9 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Syne3Q4FZC9 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Syne3Q4FZC9 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC12.69□□□□□ -0.38
Syne3Q4FZC9 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Syne3Q4FZC9 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Syne3Q4FZC9 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Syne3Q4FZC9 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC12.69□□□□□ -0.38
Syne3Q4FZC9 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Syne3Q4FZC9 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Syne3Q4FZC9 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Syne3Q4FZC9 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Syne3Q4FZC9 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Syne3Q4FZC9 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Syne3Q4FZC9 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Syne3Q4FZC9 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Syne3Q4FZC9 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Syne3Q4FZC9 Gm12015-201ENSMUST00000117065 843 ntBASIC12.69□□□□□ -0.38
Syne3Q4FZC9 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Syne3Q4FZC9 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Syne3Q4FZC9 Gm6963-201ENSMUST00000147879 379 ntBASIC12.69□□□□□ -0.38
Syne3Q4FZC9 Gm25890-201ENSMUST00000177643 165 ntBASIC12.69□□□□□ -0.38
Syne3Q4FZC9 Rnu1b2-201ENSMUST00000178073 165 ntBASIC12.69□□□□□ -0.38
Syne3Q4FZC9 Rnu1b1-201ENSMUST00000178250 165 ntBASIC12.69□□□□□ -0.38
Syne3Q4FZC9 Gm22614-201ENSMUST00000178300 165 ntBASIC12.69□□□□□ -0.38
Syne3Q4FZC9 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Syne3Q4FZC9 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC12.69□□□□□ -0.38
Syne3Q4FZC9 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Syne3Q4FZC9 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC12.69□□□□□ -0.38
Syne3Q4FZC9 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Syne3Q4FZC9 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC12.69□□□□□ -0.38
Syne3Q4FZC9 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC12.69□□□□□ -0.38
Syne3Q4FZC9 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC12.69□□□□□ -0.38
Syne3Q4FZC9 AC154252.2-201ENSMUST00000223593 767 ntBASIC12.69□□□□□ -0.38
Syne3Q4FZC9 Gzmn-202ENSMUST00000225535 989 ntBASIC12.69□□□□□ -0.38
Syne3Q4FZC9 AC163667.3-201ENSMUST00000225774 222 ntBASIC12.69□□□□□ -0.38
Syne3Q4FZC9 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Syne3Q4FZC9 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Syne3Q4FZC9 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Syne3Q4FZC9 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Syne3Q4FZC9 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Syne3Q4FZC9 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Syne3Q4FZC9 Gm22042-201ENSMUST00000082989 165 ntBASIC12.69□□□□□ -0.38
Syne3Q4FZC9 Gm26110-201ENSMUST00000083971 165 ntBASIC12.69□□□□□ -0.38
Syne3Q4FZC9 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Syne3Q4FZC9 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Syne3Q4FZC9 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Syne3Q4FZC9 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Syne3Q4FZC9 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Syne3Q4FZC9 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Syne3Q4FZC9 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Syne3Q4FZC9 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC12.69□□□□□ -0.38
Syne3Q4FZC9 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms