Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Smarcc1P97496 Gm13549-201ENSMUST00000118339 796 ntBASIC14.94□□□□□ -0.02
Smarcc1P97496 Gm9089-201ENSMUST00000122027 526 ntBASIC14.94□□□□□ -0.02
Smarcc1P97496 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Smarcc1P97496 Gm9135-201ENSMUST00000182963 990 ntBASIC14.94□□□□□ -0.02
Smarcc1P97496 Cd1d2-202ENSMUST00000192481 1131 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Smarcc1P97496 Gm9136-201ENSMUST00000193368 454 ntBASIC14.94□□□□□ -0.02
Smarcc1P97496 Gm43778-201ENSMUST00000199438 199 ntBASIC14.94□□□□□ -0.02
Smarcc1P97496 Gm6450-201ENSMUST00000200896 574 ntBASIC14.94□□□□□ -0.02
Smarcc1P97496 Crcp-204ENSMUST00000202163 931 ntTSL 2 BASIC14.94□□□□□ -0.02
Smarcc1P97496 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC14.94□□□□□ -0.02
Smarcc1P97496 Gm6722-201ENSMUST00000221586 390 ntBASIC14.94□□□□□ -0.02
Smarcc1P97496 AC126799.1-201ENSMUST00000221976 246 ntBASIC14.94□□□□□ -0.02
Smarcc1P97496 AC129308.3-201ENSMUST00000225652 524 ntBASIC14.94□□□□□ -0.02
Smarcc1P97496 Gm4604-201ENSMUST00000025040 390 ntBASIC14.94□□□□□ -0.02
Smarcc1P97496 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Smarcc1P97496 Taar8b-201ENSMUST00000092654 1035 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Smarcc1P97496 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Smarcc1P97496 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Smarcc1P97496 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Smarcc1P97496 Rtbdn-202ENSMUST00000109740 1363 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Smarcc1P97496 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Smarcc1P97496 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Smarcc1P97496 Ntrk2-204ENSMUST00000224259 3049 ntBASIC14.94□□□□□ -0.02
Smarcc1P97496 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC14.94□□□□□ -0.02
Smarcc1P97496 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Smarcc1P97496 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Smarcc1P97496 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Smarcc1P97496 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Smarcc1P97496 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Smarcc1P97496 Gm8038-201ENSMUST00000164674 2044 ntBASIC14.93□□□□□ -0.02
Smarcc1P97496 Gm16237-201ENSMUST00000156666 1319 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Smarcc1P97496 Clec4a3-201ENSMUST00000088468 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Smarcc1P97496 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Smarcc1P97496 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Smarcc1P97496 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Smarcc1P97496 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Smarcc1P97496 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Smarcc1P97496 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
Smarcc1P97496 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Smarcc1P97496 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Smarcc1P97496 Ube2q2-203ENSMUST00000122441 2081 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Smarcc1P97496 Gm6189-201ENSMUST00000164487 2082 ntBASIC14.93□□□□□ -0.02
Smarcc1P97496 Tmem39a-204ENSMUST00000163884 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Smarcc1P97496 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Smarcc1P97496 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Smarcc1P97496 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Smarcc1P97496 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Smarcc1P97496 Olfr755-ps1-201ENSMUST00000173568 910 ntBASIC14.93□□□□□ -0.02
Smarcc1P97496 Gm29292-201ENSMUST00000186169 766 ntTSL 3 BASIC14.93□□□□□ -0.02
Smarcc1P97496 Gm28166-201ENSMUST00000187637 620 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Smarcc1P97496 Gm18463-201ENSMUST00000207258 474 ntBASIC14.93□□□□□ -0.02
Smarcc1P97496 Gm7940-201ENSMUST00000218195 769 ntBASIC14.93□□□□□ -0.02
Smarcc1P97496 Gm7959-201ENSMUST00000221823 1078 ntBASIC14.93□□□□□ -0.02
Smarcc1P97496 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Smarcc1P97496 Mcts2-201ENSMUST00000062148 917 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Smarcc1P97496 Olfr1230-201ENSMUST00000099787 918 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Smarcc1P97496 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Smarcc1P97496 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Smarcc1P97496 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Smarcc1P97496 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC14.93□□□□□ -0.02
Smarcc1P97496 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Smarcc1P97496 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC14.93□□□□□ -0.02
Smarcc1P97496 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Smarcc1P97496 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Smarcc1P97496 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Smarcc1P97496 Gm37348-201ENSMUST00000193104 1789 ntBASIC14.93□□□□□ -0.02
Smarcc1P97496 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Smarcc1P97496 Chac2-202ENSMUST00000101394 1315 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Smarcc1P97496 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Smarcc1P97496 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
Smarcc1P97496 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Smarcc1P97496 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Smarcc1P97496 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Smarcc1P97496 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Smarcc1P97496 Rpl23-201ENSMUST00000103146 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Smarcc1P97496 Uqcc1-202ENSMUST00000109631 1091 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Smarcc1P97496 Rhox3c-202ENSMUST00000115189 648 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Smarcc1P97496 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC14.92□□□□□ -0.02
Smarcc1P97496 Gm4862-201ENSMUST00000170405 438 ntBASIC14.92□□□□□ -0.02
Smarcc1P97496 Rhox3a2-204ENSMUST00000184565 823 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Smarcc1P97496 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Smarcc1P97496 Gm29040-201ENSMUST00000189899 1188 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Smarcc1P97496 1700020A23Rik-203ENSMUST00000189961 541 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Smarcc1P97496 1700081H04Rik-201ENSMUST00000190550 1128 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Smarcc1P97496 Gm37013-201ENSMUST00000194544 313 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Smarcc1P97496 Gm7902-201ENSMUST00000198842 947 ntBASIC14.92□□□□□ -0.02
Smarcc1P97496 Gm7596-202ENSMUST00000202171 737 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Smarcc1P97496 Bcap31-201ENSMUST00000002091 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Smarcc1P97496 Gm45758-201ENSMUST00000212448 1006 ntBASIC14.92□□□□□ -0.02
Smarcc1P97496 AC098716.1-201ENSMUST00000213527 703 ntBASIC14.92□□□□□ -0.02
Smarcc1P97496 Sapcd1-201ENSMUST00000040151 935 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Smarcc1P97496 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Smarcc1P97496 Rhox3e-201ENSMUST00000081327 648 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Smarcc1P97496 Uba52-201ENSMUST00000081940 541 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
Smarcc1P97496 Rhox3a2-201ENSMUST00000096459 828 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Smarcc1P97496 Slc37a4-202ENSMUST00000213268 1353 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
Smarcc1P97496 Gm15784-201ENSMUST00000120260 1462 ntBASIC14.92□□□□□ -0.02
Smarcc1P97496 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Smarcc1P97496 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 55.6 ms