Protein–RNA interactions for Protein: P62322

Lsm5, U6 snRNA-associated Sm-like protein LSm5, mousemouse

Predictions only

Length 91 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm5P62322 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Lsm5P62322 Ipo4-201ENSMUST00000047131 3846 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Lsm5P62322 Gm7642-201ENSMUST00000216345 1809 ntBASIC9.91□□□□□ -0.82
Lsm5P62322 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Lsm5P62322 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC9.91□□□□□ -0.82
Lsm5P62322 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Lsm5P62322 Cmya5-201ENSMUST00000062122 11850 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Lsm5P62322 Acin1-203ENSMUST00000111484 4048 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
Lsm5P62322 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
Lsm5P62322 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Lsm5P62322 Lamc2-203ENSMUST00000185356 4916 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Lsm5P62322 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Lsm5P62322 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC9.9□□□□□ -0.82
Lsm5P62322 Ces5a-203ENSMUST00000212009 2042 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Lsm5P62322 Limd1-201ENSMUST00000026269 4848 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Lsm5P62322 Chst15-202ENSMUST00000080215 4813 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Lsm5P62322 Khnyn-201ENSMUST00000022831 3898 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Lsm5P62322 Wdr19-204ENSMUST00000203653 6279 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Lsm5P62322 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Lsm5P62322 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Lsm5P62322 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.82
Lsm5P62322 Gm17244-201ENSMUST00000192482 3416 ntBASIC9.9□□□□□ -0.82
Lsm5P62322 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Lsm5P62322 Gm43522-201ENSMUST00000196697 1922 ntBASIC9.9□□□□□ -0.82
Lsm5P62322 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.82
Lsm5P62322 Mier1-204ENSMUST00000106857 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Lsm5P62322 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Lsm5P62322 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC9.9□□□□□ -0.82
Lsm5P62322 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Lsm5P62322 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC9.9□□□□□ -0.82
Lsm5P62322 Tardbp-206ENSMUST00000105702 6425 ntTSL 5 BASIC9.9□□□□□ -0.82
Lsm5P62322 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC9.9□□□□□ -0.82
Lsm5P62322 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC9.9□□□□□ -0.82
Lsm5P62322 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Lsm5P62322 Gm12928-201ENSMUST00000117115 573 ntBASIC9.9□□□□□ -0.82
Lsm5P62322 Gm11964-201ENSMUST00000120982 444 ntBASIC9.9□□□□□ -0.82
Lsm5P62322 Gm2231-201ENSMUST00000125661 612 ntBASIC9.9□□□□□ -0.82
Lsm5P62322 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Lsm5P62322 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC9.9□□□□□ -0.82
Lsm5P62322 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC9.9□□□□□ -0.82
Lsm5P62322 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Lsm5P62322 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Lsm5P62322 Gm38092-201ENSMUST00000195600 653 ntBASIC9.9□□□□□ -0.82
Lsm5P62322 Gm38671-201ENSMUST00000200573 130 ntBASIC9.9□□□□□ -0.82
Lsm5P62322 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
Lsm5P62322 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC9.9□□□□□ -0.82
Lsm5P62322 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC9.9□□□□□ -0.82
Lsm5P62322 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Lsm5P62322 Gm8420-201ENSMUST00000097103 598 ntBASIC9.9□□□□□ -0.82
Lsm5P62322 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Lsm5P62322 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Lsm5P62322 Tenm2-201ENSMUST00000057207 8298 ntAPPRIS ALT1 TSL 5 BASIC9.9□□□□□ -0.82
Lsm5P62322 Gm38273-201ENSMUST00000194987 2382 ntBASIC9.9□□□□□ -0.82
Lsm5P62322 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Lsm5P62322 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC9.9□□□□□ -0.82
Lsm5P62322 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Lsm5P62322 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Lsm5P62322 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Lsm5P62322 4933406M09Rik-201ENSMUST00000162187 1768 ntAPPRIS P1 TSL 2 BASIC9.9□□□□□ -0.82
Lsm5P62322 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Lsm5P62322 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.82
Lsm5P62322 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.83
Lsm5P62322 Ets2-201ENSMUST00000023612 3890 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Lsm5P62322 Man2b2-201ENSMUST00000031002 3330 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Lsm5P62322 Tnk2-207ENSMUST00000115126 4358 ntTSL 5 BASIC9.9□□□□□ -0.83
Lsm5P62322 Rhbdf2-202ENSMUST00000103029 3593 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Lsm5P62322 Pml-202ENSMUST00000114136 4343 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.83
Lsm5P62322 Jmjd4-201ENSMUST00000045279 4315 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
Lsm5P62322 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Lsm5P62322 Mllt3-201ENSMUST00000078090 6069 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Lsm5P62322 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC9.9□□□□□ -0.83
Lsm5P62322 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC9.9□□□□□ -0.83
Lsm5P62322 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Lsm5P62322 Pcdhga7-201ENSMUST00000192511 4730 ntAPPRIS P2 TSL 1 (best) BASIC9.9□□□□□ -0.83
Lsm5P62322 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Lsm5P62322 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC9.9□□□□□ -0.83
Lsm5P62322 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
Lsm5P62322 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Lsm5P62322 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Lsm5P62322 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Lsm5P62322 Gm6189-201ENSMUST00000164487 2082 ntBASIC9.89□□□□□ -0.83
Lsm5P62322 AC154404.1-201ENSMUST00000223601 2077 ntBASIC9.89□□□□□ -0.83
Lsm5P62322 Slc2a10-201ENSMUST00000029196 3544 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Lsm5P62322 Mypn-201ENSMUST00000095580 5246 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Lsm5P62322 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC9.89□□□□□ -0.83
Lsm5P62322 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
Lsm5P62322 Rasgrp4-210ENSMUST00000203070 3008 ntTSL 5 BASIC9.89□□□□□ -0.83
Lsm5P62322 Srrt-201ENSMUST00000040873 3024 ntAPPRIS P3 TSL 5 BASIC9.89□□□□□ -0.83
Lsm5P62322 Slc45a4-207ENSMUST00000151288 7509 ntAPPRIS P2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Lsm5P62322 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Lsm5P62322 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Lsm5P62322 Fbxl18-202ENSMUST00000110766 7857 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Lsm5P62322 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Lsm5P62322 Styx-205ENSMUST00000226873 12974 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
Lsm5P62322 D830039M14Rik-202ENSMUST00000217740 3362 ntBASIC9.89□□□□□ -0.83
Lsm5P62322 Zfp609-201ENSMUST00000159109 7777 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
Lsm5P62322 Vwa5b2-202ENSMUST00000096197 4527 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
Lsm5P62322 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Lsm5P62322 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC9.89□□□□□ -0.83
Lsm5P62322 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC9.89□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 61.7 ms