Protein–RNA interactions for Protein: P28235

Gja4, Gap junction alpha-4 protein, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gja4P28235 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Gja4P28235 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Gja4P28235 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC11.95□□□□□ -0.5
Gja4P28235 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Gja4P28235 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC11.95□□□□□ -0.5
Gja4P28235 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC11.95□□□□□ -0.5
Gja4P28235 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Gja4P28235 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Gja4P28235 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Gja4P28235 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC11.94□□□□□ -0.5
Gja4P28235 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Gja4P28235 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Gja4P28235 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Gja4P28235 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Gja4P28235 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Gja4P28235 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Gja4P28235 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Gja4P28235 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Gja4P28235 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Gja4P28235 Pcnp-203ENSMUST00000119981 901 ntTSL 3 BASIC11.94□□□□□ -0.5
Gja4P28235 Gm7150-201ENSMUST00000122032 981 ntBASIC11.94□□□□□ -0.5
Gja4P28235 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Gja4P28235 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
Gja4P28235 Gm17877-201ENSMUST00000192578 814 ntBASIC11.94□□□□□ -0.5
Gja4P28235 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC11.94□□□□□ -0.5
Gja4P28235 Gm45460-201ENSMUST00000211385 1038 ntTSL 5 BASIC11.94□□□□□ -0.5
Gja4P28235 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Gja4P28235 Tbca-201ENSMUST00000046644 559 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Gja4P28235 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Gja4P28235 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Gja4P28235 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Gja4P28235 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC11.94□□□□□ -0.5
Gja4P28235 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Gja4P28235 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Gja4P28235 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Gja4P28235 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Gja4P28235 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Gja4P28235 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Gja4P28235 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Gja4P28235 Gm44152-201ENSMUST00000205007 1691 ntBASIC11.94□□□□□ -0.5
Gja4P28235 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Gja4P28235 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Gja4P28235 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Gja4P28235 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
Gja4P28235 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Gja4P28235 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Gja4P28235 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Gja4P28235 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Gja4P28235 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Gja4P28235 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Gja4P28235 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Gja4P28235 Gm5422-201ENSMUST00000050717 2721 ntBASIC11.93□□□□□ -0.5
Gja4P28235 AC166836.1-201ENSMUST00000219933 1795 ntBASIC11.93□□□□□ -0.5
Gja4P28235 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Gja4P28235 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Gja4P28235 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Gja4P28235 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC11.93□□□□□ -0.5
Gja4P28235 Selenot-ps-201ENSMUST00000119098 593 ntBASIC11.93□□□□□ -0.5
Gja4P28235 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC11.93□□□□□ -0.5
Gja4P28235 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC11.93□□□□□ -0.5
Gja4P28235 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC11.93□□□□□ -0.5
Gja4P28235 Gm18159-201ENSMUST00000174516 1070 ntBASIC11.93□□□□□ -0.5
Gja4P28235 Gm37028-201ENSMUST00000194276 107 ntBASIC11.93□□□□□ -0.5
Gja4P28235 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Gja4P28235 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Gja4P28235 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC11.93□□□□□ -0.5
Gja4P28235 Gm7940-201ENSMUST00000218195 769 ntBASIC11.93□□□□□ -0.5
Gja4P28235 AC153929.1-201ENSMUST00000219009 303 ntBASIC11.93□□□□□ -0.5
Gja4P28235 AC166341.2-201ENSMUST00000220571 120 ntBASIC11.93□□□□□ -0.5
Gja4P28235 Gm9661-201ENSMUST00000221611 1122 ntBASIC11.93□□□□□ -0.5
Gja4P28235 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Gja4P28235 Gm9873-201ENSMUST00000063891 1097 ntBASIC11.93□□□□□ -0.5
Gja4P28235 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Gja4P28235 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Gja4P28235 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC11.93□□□□□ -0.5
Gja4P28235 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Gja4P28235 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Gja4P28235 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Gja4P28235 Ntrk2-204ENSMUST00000224259 3049 ntBASIC11.93□□□□□ -0.5
Gja4P28235 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Gja4P28235 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Gja4P28235 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Gja4P28235 Adra1a-206ENSMUST00000225182 2337 ntBASIC11.93□□□□□ -0.5
Gja4P28235 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC11.93□□□□□ -0.5
Gja4P28235 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Gja4P28235 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Gja4P28235 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Gja4P28235 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Gja4P28235 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Gja4P28235 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Gja4P28235 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Gja4P28235 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Gja4P28235 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Gja4P28235 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Gja4P28235 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Gja4P28235 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Gja4P28235 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Gja4P28235 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Gja4P28235 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Gja4P28235 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms