Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Col8a2P25318 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Col8a2P25318 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
Col8a2P25318 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Col8a2P25318 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Col8a2P25318 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC9.97□□□□□ -0.81
Col8a2P25318 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Col8a2P25318 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Col8a2P25318 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC9.97□□□□□ -0.81
Col8a2P25318 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC9.97□□□□□ -0.81
Col8a2P25318 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC9.96□□□□□ -0.81
Col8a2P25318 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC9.96□□□□□ -0.81
Col8a2P25318 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC9.96□□□□□ -0.81
Col8a2P25318 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.81
Col8a2P25318 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Col8a2P25318 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Col8a2P25318 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC9.96□□□□□ -0.81
Col8a2P25318 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Col8a2P25318 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Col8a2P25318 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Col8a2P25318 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.81
Col8a2P25318 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Col8a2P25318 AC155298.2-201ENSMUST00000225485 6226 ntBASIC9.96□□□□□ -0.81
Col8a2P25318 AC129931.1-201ENSMUST00000228865 1861 ntBASIC9.96□□□□□ -0.81
Col8a2P25318 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Col8a2P25318 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Col8a2P25318 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Col8a2P25318 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Col8a2P25318 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Col8a2P25318 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Col8a2P25318 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Col8a2P25318 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.82
Col8a2P25318 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Col8a2P25318 Gm11511-201ENSMUST00000118146 540 ntBASIC9.96□□□□□ -0.82
Col8a2P25318 Gm12501-201ENSMUST00000119163 529 ntBASIC9.96□□□□□ -0.82
Col8a2P25318 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Col8a2P25318 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC9.96□□□□□ -0.82
Col8a2P25318 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Col8a2P25318 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC9.96□□□□□ -0.82
Col8a2P25318 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC9.96□□□□□ -0.82
Col8a2P25318 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.82
Col8a2P25318 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.82
Col8a2P25318 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC9.96□□□□□ -0.82
Col8a2P25318 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC9.96□□□□□ -0.82
Col8a2P25318 Gm42629-201ENSMUST00000199063 1102 ntBASIC9.96□□□□□ -0.82
Col8a2P25318 Gm8956-201ENSMUST00000203939 825 ntBASIC9.96□□□□□ -0.82
Col8a2P25318 Gm4157-201ENSMUST00000211647 679 ntBASIC9.96□□□□□ -0.82
Col8a2P25318 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC9.96□□□□□ -0.82
Col8a2P25318 Spcs1-203ENSMUST00000226374 592 ntBASIC9.96□□□□□ -0.82
Col8a2P25318 Gm10702-201ENSMUST00000098929 1268 ntBASIC9.96□□□□□ -0.82
Col8a2P25318 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Col8a2P25318 Gm43075-201ENSMUST00000198613 3905 ntBASIC9.96□□□□□ -0.82
Col8a2P25318 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Col8a2P25318 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Col8a2P25318 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Col8a2P25318 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Col8a2P25318 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Col8a2P25318 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Col8a2P25318 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Col8a2P25318 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC9.96□□□□□ -0.82
Col8a2P25318 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.82
Col8a2P25318 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.82
Col8a2P25318 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Col8a2P25318 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.82
Col8a2P25318 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Col8a2P25318 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Col8a2P25318 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Col8a2P25318 Gm7114-201ENSMUST00000190159 1789 ntBASIC9.96□□□□□ -0.82
Col8a2P25318 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC9.96□□□□□ -0.82
Col8a2P25318 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Col8a2P25318 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
Col8a2P25318 Gm5380-201ENSMUST00000119296 2136 ntBASIC9.95□□□□□ -0.82
Col8a2P25318 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Col8a2P25318 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
Col8a2P25318 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Col8a2P25318 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC9.95□□□□□ -0.82
Col8a2P25318 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Col8a2P25318 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Col8a2P25318 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Col8a2P25318 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC9.95□□□□□ -0.82
Col8a2P25318 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Col8a2P25318 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
Col8a2P25318 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Col8a2P25318 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC9.95□□□□□ -0.82
Col8a2P25318 Gm6335-201ENSMUST00000118081 1194 ntBASIC9.95□□□□□ -0.82
Col8a2P25318 Gm13045-201ENSMUST00000119019 712 ntBASIC9.95□□□□□ -0.82
Col8a2P25318 Gm7816-201ENSMUST00000119884 1194 ntBASIC9.95□□□□□ -0.82
Col8a2P25318 Gm13461-201ENSMUST00000120980 662 ntBASIC9.95□□□□□ -0.82
Col8a2P25318 Gm15542-201ENSMUST00000121585 1194 ntBASIC9.95□□□□□ -0.82
Col8a2P25318 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC9.95□□□□□ -0.82
Col8a2P25318 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC9.95□□□□□ -0.82
Col8a2P25318 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC9.95□□□□□ -0.82
Col8a2P25318 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Col8a2P25318 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC9.95□□□□□ -0.82
Col8a2P25318 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC9.95□□□□□ -0.82
Col8a2P25318 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC9.95□□□□□ -0.82
Col8a2P25318 Gm1821-202ENSMUST00000227415 750 ntBASIC9.95□□□□□ -0.82
Col8a2P25318 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Col8a2P25318 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
Col8a2P25318 Gm5705-201ENSMUST00000066241 711 ntBASIC9.95□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms