Protein–RNA interactions for Protein: P22518

Clk1, Dual specificity protein kinase CLK1, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1P22518 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Clk1P22518 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Clk1P22518 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC11.25□□□□□ -0.61
Clk1P22518 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Clk1P22518 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Clk1P22518 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Clk1P22518 Acvrl1-201ENSMUST00000000542 3640 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Clk1P22518 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Clk1P22518 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Clk1P22518 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Clk1P22518 Ror2-202ENSMUST00000130235 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Clk1P22518 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Clk1P22518 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Clk1P22518 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Clk1P22518 Cdc42ep4-202ENSMUST00000106616 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Clk1P22518 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Clk1P22518 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Clk1P22518 Raver1-201ENSMUST00000115487 3470 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Clk1P22518 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Clk1P22518 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Clk1P22518 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Clk1P22518 Bmp3-203ENSMUST00000200388 6609 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Clk1P22518 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Clk1P22518 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Clk1P22518 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Clk1P22518 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Clk1P22518 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Clk1P22518 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC11.24□□□□□ -0.61
Clk1P22518 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC11.24□□□□□ -0.61
Clk1P22518 Gm5940-201ENSMUST00000117582 1068 ntBASIC11.24□□□□□ -0.61
Clk1P22518 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC11.24□□□□□ -0.61
Clk1P22518 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC11.24□□□□□ -0.61
Clk1P22518 Ap1g1-206ENSMUST00000179104 1096 ntBASIC11.24□□□□□ -0.61
Clk1P22518 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Clk1P22518 Gm19963-201ENSMUST00000208413 1255 ntBASIC11.24□□□□□ -0.61
Clk1P22518 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC11.24□□□□□ -0.61
Clk1P22518 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Clk1P22518 Gm8227-201ENSMUST00000223306 571 ntBASIC11.24□□□□□ -0.61
Clk1P22518 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Clk1P22518 Gm7399-201ENSMUST00000032395 858 ntBASIC11.24□□□□□ -0.61
Clk1P22518 Gm9899-201ENSMUST00000065519 555 ntBASIC11.24□□□□□ -0.61
Clk1P22518 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Clk1P22518 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Clk1P22518 AC126262.1-201ENSMUST00000221802 1904 ntBASIC11.24□□□□□ -0.61
Clk1P22518 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Clk1P22518 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Clk1P22518 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Clk1P22518 Gm43727-201ENSMUST00000198021 2647 ntBASIC11.24□□□□□ -0.61
Clk1P22518 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Clk1P22518 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Clk1P22518 Ppp1r12a-205ENSMUST00000219263 3355 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Clk1P22518 Zfp959-201ENSMUST00000054780 2028 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Clk1P22518 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Clk1P22518 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Clk1P22518 Gpm6b-208ENSMUST00000112233 2949 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Clk1P22518 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Clk1P22518 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Clk1P22518 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Clk1P22518 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC11.24□□□□□ -0.61
Clk1P22518 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Clk1P22518 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Clk1P22518 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Clk1P22518 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Clk1P22518 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Clk1P22518 Fbxo40-202ENSMUST00000114806 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Clk1P22518 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Clk1P22518 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC11.23□□□□□ -0.61
Clk1P22518 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Clk1P22518 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Clk1P22518 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Clk1P22518 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Clk1P22518 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Clk1P22518 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Clk1P22518 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Clk1P22518 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Clk1P22518 Mid1-201ENSMUST00000036753 3753 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Clk1P22518 Gm43984-201ENSMUST00000204572 2864 ntBASIC11.23□□□□□ -0.61
Clk1P22518 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Clk1P22518 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Clk1P22518 Trp53inp2-201ENSMUST00000043237 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Clk1P22518 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Clk1P22518 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Clk1P22518 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Clk1P22518 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Clk1P22518 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Clk1P22518 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Clk1P22518 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Clk1P22518 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Clk1P22518 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Clk1P22518 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Clk1P22518 Gm9083-201ENSMUST00000120423 819 ntBASIC11.23□□□□□ -0.61
Clk1P22518 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Clk1P22518 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC11.23□□□□□ -0.61
Clk1P22518 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Clk1P22518 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Clk1P22518 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC11.23□□□□□ -0.61
Clk1P22518 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC11.23□□□□□ -0.61
Clk1P22518 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC11.23□□□□□ -0.61
Clk1P22518 Gm26956-201ENSMUST00000182176 986 ntBASIC11.23□□□□□ -0.61
Clk1P22518 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC11.23□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms