Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Cpne9-201ENSMUST00000041203 2777 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
BdnfP21237 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
BdnfP21237 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC11.5□□□□□ -0.57
BdnfP21237 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
BdnfP21237 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
BdnfP21237 Scnn1b-201ENSMUST00000033161 2478 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
BdnfP21237 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC11.5□□□□□ -0.57
BdnfP21237 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
BdnfP21237 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
BdnfP21237 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
BdnfP21237 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
BdnfP21237 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
BdnfP21237 2810006K23Rik-201ENSMUST00000077376 1677 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
BdnfP21237 Chd1-201ENSMUST00000024620 3196 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
BdnfP21237 Gm2606-201ENSMUST00000100754 1002 ntBASIC11.5□□□□□ -0.57
BdnfP21237 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC11.5□□□□□ -0.57
BdnfP21237 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
BdnfP21237 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
BdnfP21237 Gm12286-201ENSMUST00000119246 1002 ntBASIC11.5□□□□□ -0.57
BdnfP21237 Gm13829-201ENSMUST00000119600 138 ntBASIC11.5□□□□□ -0.57
BdnfP21237 Gm13342-201ENSMUST00000121055 207 ntBASIC11.5□□□□□ -0.57
BdnfP21237 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
BdnfP21237 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
BdnfP21237 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC11.5□□□□□ -0.57
BdnfP21237 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
BdnfP21237 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
BdnfP21237 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC11.5□□□□□ -0.57
BdnfP21237 Gm37008-201ENSMUST00000195712 319 ntBASIC11.5□□□□□ -0.57
BdnfP21237 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC11.5□□□□□ -0.57
BdnfP21237 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC11.5□□□□□ -0.57
BdnfP21237 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
BdnfP21237 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
BdnfP21237 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
BdnfP21237 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
BdnfP21237 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
BdnfP21237 Gm10076-201ENSMUST00000073238 384 ntBASIC11.5□□□□□ -0.57
BdnfP21237 H2-M9-202ENSMUST00000087167 1070 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
BdnfP21237 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
BdnfP21237 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
BdnfP21237 Cir1-201ENSMUST00000058615 2821 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
BdnfP21237 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
BdnfP21237 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
BdnfP21237 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
BdnfP21237 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
BdnfP21237 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
BdnfP21237 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC11.5□□□□□ -0.57
BdnfP21237 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
BdnfP21237 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC11.5□□□□□ -0.57
BdnfP21237 Gm43447-201ENSMUST00000198471 1535 ntBASIC11.5□□□□□ -0.57
BdnfP21237 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
BdnfP21237 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
BdnfP21237 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
BdnfP21237 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
BdnfP21237 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
BdnfP21237 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
BdnfP21237 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
BdnfP21237 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
BdnfP21237 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
BdnfP21237 Gm6211-201ENSMUST00000147973 4275 ntBASIC11.49□□□□□ -0.57
BdnfP21237 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC11.49□□□□□ -0.57
BdnfP21237 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
BdnfP21237 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC11.49□□□□□ -0.57
BdnfP21237 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
BdnfP21237 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
BdnfP21237 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
BdnfP21237 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
BdnfP21237 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
BdnfP21237 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
BdnfP21237 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
BdnfP21237 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
BdnfP21237 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC11.49□□□□□ -0.57
BdnfP21237 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
BdnfP21237 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC11.49□□□□□ -0.57
BdnfP21237 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC11.49□□□□□ -0.57
BdnfP21237 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC11.49□□□□□ -0.57
BdnfP21237 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
BdnfP21237 AC126253.1-202ENSMUST00000226732 835 ntBASIC11.49□□□□□ -0.57
BdnfP21237 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
BdnfP21237 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
BdnfP21237 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
BdnfP21237 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
BdnfP21237 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
BdnfP21237 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC11.49□□□□□ -0.57
BdnfP21237 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
BdnfP21237 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
BdnfP21237 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
BdnfP21237 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
BdnfP21237 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC11.49□□□□□ -0.57
BdnfP21237 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC11.49□□□□□ -0.57
BdnfP21237 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC11.49□□□□□ -0.57
BdnfP21237 Gm43112-201ENSMUST00000196665 3122 ntBASIC11.49□□□□□ -0.57
BdnfP21237 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
BdnfP21237 Mtss1l-205ENSMUST00000144041 3225 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
BdnfP21237 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
BdnfP21237 Gm6189-201ENSMUST00000164487 2082 ntBASIC11.48□□□□□ -0.57
BdnfP21237 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
BdnfP21237 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
BdnfP21237 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
BdnfP21237 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
BdnfP21237 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms