Protein–RNA interactions for Protein: P09025

Hoxc8, Homeobox protein Hox-C8, mousemouse

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc8P09025 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC12.65□□□□□ -0.39
Hoxc8P09025 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
Hoxc8P09025 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
Hoxc8P09025 AC138329.2-201ENSMUST00000225579 1842 ntBASIC12.65□□□□□ -0.39
Hoxc8P09025 Harbi1-202ENSMUST00000111322 1316 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Hoxc8P09025 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hoxc8P09025 Gm7278-201ENSMUST00000119836 1401 ntBASIC12.64□□□□□ -0.39
Hoxc8P09025 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC12.64□□□□□ -0.39
Hoxc8P09025 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hoxc8P09025 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hoxc8P09025 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hoxc8P09025 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Hoxc8P09025 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC12.64□□□□□ -0.39
Hoxc8P09025 Gm11422-201ENSMUST00000118925 1103 ntBASIC12.64□□□□□ -0.39
Hoxc8P09025 Gm15549-201ENSMUST00000121595 622 ntBASIC12.64□□□□□ -0.39
Hoxc8P09025 Gm10169-201ENSMUST00000121822 348 ntBASIC12.64□□□□□ -0.39
Hoxc8P09025 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC12.64□□□□□ -0.39
Hoxc8P09025 E130307A14Rik-203ENSMUST00000136862 608 ntTSL 3 BASIC12.64□□□□□ -0.39
Hoxc8P09025 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hoxc8P09025 Gm25554-201ENSMUST00000158075 113 ntBASIC12.64□□□□□ -0.39
Hoxc8P09025 Gm20495-201ENSMUST00000173902 235 ntBASIC12.64□□□□□ -0.39
Hoxc8P09025 Gm29292-201ENSMUST00000186169 766 ntTSL 3 BASIC12.64□□□□□ -0.39
Hoxc8P09025 Gm43163-201ENSMUST00000196571 442 ntBASIC12.64□□□□□ -0.39
Hoxc8P09025 Gm18561-201ENSMUST00000206027 804 ntBASIC12.64□□□□□ -0.39
Hoxc8P09025 Gm45120-201ENSMUST00000208880 408 ntBASIC12.64□□□□□ -0.39
Hoxc8P09025 Gm39288-201ENSMUST00000210554 446 ntBASIC12.64□□□□□ -0.39
Hoxc8P09025 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Hoxc8P09025 Gm4065-202ENSMUST00000218911 986 ntTSL 3 BASIC12.64□□□□□ -0.39
Hoxc8P09025 Pbld1-206ENSMUST00000219687 788 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Hoxc8P09025 CT009536.2-201ENSMUST00000225370 665 ntBASIC12.64□□□□□ -0.39
Hoxc8P09025 1700012P22Rik-201ENSMUST00000030323 974 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hoxc8P09025 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Hoxc8P09025 Rtbdn-202ENSMUST00000109740 1363 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hoxc8P09025 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Hoxc8P09025 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Hoxc8P09025 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC12.64□□□□□ -0.39
Hoxc8P09025 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Hoxc8P09025 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hoxc8P09025 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hoxc8P09025 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Hoxc8P09025 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Hoxc8P09025 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxc8P09025 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Hoxc8P09025 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Hoxc8P09025 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxc8P09025 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxc8P09025 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxc8P09025 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxc8P09025 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxc8P09025 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxc8P09025 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxc8P09025 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxc8P09025 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
Hoxc8P09025 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC12.63□□□□□ -0.39
Hoxc8P09025 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxc8P09025 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Hoxc8P09025 Gm16219-201ENSMUST00000120096 274 ntBASIC12.63□□□□□ -0.39
Hoxc8P09025 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Hoxc8P09025 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxc8P09025 Zfp667-204ENSMUST00000153840 596 ntTSL 3 BASIC12.63□□□□□ -0.39
Hoxc8P09025 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC12.63□□□□□ -0.39
Hoxc8P09025 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC12.63□□□□□ -0.39
Hoxc8P09025 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Hoxc8P09025 Snhg8-201ENSMUST00000196466 448 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxc8P09025 AC124457.1-201ENSMUST00000198845 120 ntBASIC12.63□□□□□ -0.39
Hoxc8P09025 Gm5298-201ENSMUST00000201122 892 ntBASIC12.63□□□□□ -0.39
Hoxc8P09025 Gm3726-201ENSMUST00000203110 785 ntBASIC12.63□□□□□ -0.39
Hoxc8P09025 Gng8-202ENSMUST00000205459 522 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
Hoxc8P09025 Gm45758-201ENSMUST00000212448 1006 ntBASIC12.63□□□□□ -0.39
Hoxc8P09025 Ap3s1-202ENSMUST00000224622 978 ntBASIC12.63□□□□□ -0.39
Hoxc8P09025 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxc8P09025 Them5-201ENSMUST00000029794 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxc8P09025 Hils1-201ENSMUST00000038928 864 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Hoxc8P09025 Rpl3l-201ENSMUST00000045186 1033 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxc8P09025 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxc8P09025 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxc8P09025 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxc8P09025 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxc8P09025 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxc8P09025 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxc8P09025 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxc8P09025 Gm19692-201ENSMUST00000203856 2084 ntBASIC12.63□□□□□ -0.39
Hoxc8P09025 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxc8P09025 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxc8P09025 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxc8P09025 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC12.63□□□□□ -0.39
Hoxc8P09025 AC130823.1-201ENSMUST00000228929 1549 ntBASIC12.62□□□□□ -0.39
Hoxc8P09025 Bmp4-202ENSMUST00000100676 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxc8P09025 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxc8P09025 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxc8P09025 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC12.62□□□□□ -0.39
Hoxc8P09025 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxc8P09025 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxc8P09025 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxc8P09025 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxc8P09025 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Hoxc8P09025 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxc8P09025 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxc8P09025 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
Hoxc8P09025 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms