Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Gm43365-201ENSMUST00000196522 2106 ntBASIC11.84□□□□□ -0.51
Pdlim1O70400 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pdlim1O70400 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pdlim1O70400 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Pdlim1O70400 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Pdlim1O70400 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Pdlim1O70400 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Pdlim1O70400 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Pdlim1O70400 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC11.84□□□□□ -0.51
Pdlim1O70400 Gm7993-201ENSMUST00000200970 1384 ntBASIC11.84□□□□□ -0.51
Pdlim1O70400 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Pdlim1O70400 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC11.84□□□□□ -0.51
Pdlim1O70400 AC173482.6-201ENSMUST00000225889 1741 ntBASIC11.84□□□□□ -0.51
Pdlim1O70400 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Pdlim1O70400 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pdlim1O70400 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pdlim1O70400 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pdlim1O70400 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pdlim1O70400 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Pdlim1O70400 Gm15711-201ENSMUST00000118889 535 ntBASIC11.84□□□□□ -0.51
Pdlim1O70400 Gm14441-201ENSMUST00000121960 540 ntBASIC11.84□□□□□ -0.51
Pdlim1O70400 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC11.84□□□□□ -0.51
Pdlim1O70400 Gm9034-201ENSMUST00000182071 1005 ntBASIC11.84□□□□□ -0.51
Pdlim1O70400 Gm6114-201ENSMUST00000182472 968 ntBASIC11.84□□□□□ -0.51
Pdlim1O70400 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pdlim1O70400 Gm29199-201ENSMUST00000187766 775 ntBASIC11.84□□□□□ -0.51
Pdlim1O70400 Gm18056-201ENSMUST00000207670 568 ntBASIC11.84□□□□□ -0.51
Pdlim1O70400 Gm18061-201ENSMUST00000208350 562 ntBASIC11.84□□□□□ -0.51
Pdlim1O70400 Gm18063-201ENSMUST00000208529 568 ntBASIC11.84□□□□□ -0.51
Pdlim1O70400 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC11.84□□□□□ -0.51
Pdlim1O70400 Gm18052-201ENSMUST00000208750 559 ntBASIC11.84□□□□□ -0.51
Pdlim1O70400 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC11.84□□□□□ -0.51
Pdlim1O70400 Gm21027-201ENSMUST00000219300 1236 ntBASIC11.84□□□□□ -0.51
Pdlim1O70400 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Pdlim1O70400 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pdlim1O70400 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Pdlim1O70400 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC11.84□□□□□ -0.51
Pdlim1O70400 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Pdlim1O70400 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Pdlim1O70400 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC11.84□□□□□ -0.51
Pdlim1O70400 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC11.84□□□□□ -0.51
Pdlim1O70400 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Pdlim1O70400 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC11.84□□□□□ -0.51
Pdlim1O70400 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pdlim1O70400 Gm19817-201ENSMUST00000199764 2132 ntBASIC11.84□□□□□ -0.51
Pdlim1O70400 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pdlim1O70400 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pdlim1O70400 Ddah1-202ENSMUST00000120310 2291 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Pdlim1O70400 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Pdlim1O70400 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pdlim1O70400 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC11.84□□□□□ -0.51
Pdlim1O70400 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC11.84□□□□□ -0.51
Pdlim1O70400 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pdlim1O70400 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.51
Pdlim1O70400 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC11.83□□□□□ -0.51
Pdlim1O70400 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC11.83□□□□□ -0.51
Pdlim1O70400 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Pdlim1O70400 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Pdlim1O70400 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Pdlim1O70400 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Pdlim1O70400 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC11.83□□□□□ -0.52
Pdlim1O70400 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pdlim1O70400 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pdlim1O70400 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pdlim1O70400 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pdlim1O70400 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pdlim1O70400 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pdlim1O70400 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pdlim1O70400 Gm11439-201ENSMUST00000118598 409 ntBASIC11.83□□□□□ -0.52
Pdlim1O70400 Gm12266-201ENSMUST00000120311 962 ntBASIC11.83□□□□□ -0.52
Pdlim1O70400 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC11.83□□□□□ -0.52
Pdlim1O70400 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pdlim1O70400 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC11.83□□□□□ -0.52
Pdlim1O70400 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Pdlim1O70400 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Pdlim1O70400 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pdlim1O70400 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Pdlim1O70400 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Pdlim1O70400 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC11.83□□□□□ -0.52
Pdlim1O70400 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pdlim1O70400 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
Pdlim1O70400 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Pdlim1O70400 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pdlim1O70400 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Pdlim1O70400 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pdlim1O70400 Gm19692-201ENSMUST00000203856 2084 ntBASIC11.83□□□□□ -0.52
Pdlim1O70400 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Pdlim1O70400 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pdlim1O70400 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Pdlim1O70400 AC166359.1-201ENSMUST00000220243 1871 ntBASIC11.83□□□□□ -0.52
Pdlim1O70400 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pdlim1O70400 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pdlim1O70400 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pdlim1O70400 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pdlim1O70400 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Pdlim1O70400 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Pdlim1O70400 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pdlim1O70400 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC11.82□□□□□ -0.52
Pdlim1O70400 Gm43807-201ENSMUST00000200678 1781 ntBASIC11.82□□□□□ -0.52
Pdlim1O70400 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 68.3 ms