Protein–RNA interactions for Protein: O55038

Cxcl13, C-X-C motif chemokine 13, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl13O55038 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Cxcl13O55038 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
Cxcl13O55038 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Cxcl13O55038 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Cxcl13O55038 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Cxcl13O55038 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
Cxcl13O55038 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Cxcl13O55038 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
Cxcl13O55038 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Cxcl13O55038 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
Cxcl13O55038 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Cxcl13O55038 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Cxcl13O55038 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Cxcl13O55038 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
Cxcl13O55038 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC10.1□□□□□ -0.79
Cxcl13O55038 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC10.1□□□□□ -0.79
Cxcl13O55038 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Cxcl13O55038 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Cxcl13O55038 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Cxcl13O55038 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
Cxcl13O55038 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC10.09□□□□□ -0.79
Cxcl13O55038 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
Cxcl13O55038 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Cxcl13O55038 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Cxcl13O55038 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Cxcl13O55038 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Cxcl13O55038 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC10.09□□□□□ -0.79
Cxcl13O55038 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Cxcl13O55038 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Cxcl13O55038 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Cxcl13O55038 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Cxcl13O55038 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Cxcl13O55038 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Cxcl13O55038 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Cxcl13O55038 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Cxcl13O55038 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Cxcl13O55038 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Cxcl13O55038 Gm12579-201ENSMUST00000118040 783 ntBASIC10.09□□□□□ -0.79
Cxcl13O55038 Gm8731-201ENSMUST00000118088 412 ntBASIC10.09□□□□□ -0.79
Cxcl13O55038 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
Cxcl13O55038 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
Cxcl13O55038 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Cxcl13O55038 Gm5852-201ENSMUST00000194119 1021 ntBASIC10.09□□□□□ -0.79
Cxcl13O55038 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Cxcl13O55038 Gm44126-201ENSMUST00000204831 514 ntBASIC10.09□□□□□ -0.79
Cxcl13O55038 Gm9132-201ENSMUST00000210182 832 ntBASIC10.09□□□□□ -0.79
Cxcl13O55038 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Cxcl13O55038 Gm6867-201ENSMUST00000219165 425 ntBASIC10.09□□□□□ -0.79
Cxcl13O55038 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Cxcl13O55038 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
Cxcl13O55038 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Cxcl13O55038 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Cxcl13O55038 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
Cxcl13O55038 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC10.09□□□□□ -0.79
Cxcl13O55038 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Cxcl13O55038 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Cxcl13O55038 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Cxcl13O55038 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Cxcl13O55038 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
Cxcl13O55038 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Cxcl13O55038 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Cxcl13O55038 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Cxcl13O55038 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
Cxcl13O55038 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC10.09□□□□□ -0.79
Cxcl13O55038 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
Cxcl13O55038 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Cxcl13O55038 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
Cxcl13O55038 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Cxcl13O55038 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Cxcl13O55038 Gm21998-201ENSMUST00000117552 1308 ntBASIC10.08□□□□□ -0.8
Cxcl13O55038 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC10.08□□□□□ -0.8
Cxcl13O55038 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Cxcl13O55038 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC10.08□□□□□ -0.8
Cxcl13O55038 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Cxcl13O55038 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Cxcl13O55038 Gm17435-202ENSMUST00000212699 1998 ntBASIC10.08□□□□□ -0.8
Cxcl13O55038 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC10.08□□□□□ -0.8
Cxcl13O55038 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Cxcl13O55038 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Cxcl13O55038 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
Cxcl13O55038 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Cxcl13O55038 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Cxcl13O55038 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
Cxcl13O55038 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Cxcl13O55038 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Cxcl13O55038 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Cxcl13O55038 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Cxcl13O55038 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Cxcl13O55038 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Cxcl13O55038 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
Cxcl13O55038 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
Cxcl13O55038 Gm14314-201ENSMUST00000118225 1015 ntBASIC10.08□□□□□ -0.8
Cxcl13O55038 Gm11956-201ENSMUST00000119525 512 ntBASIC10.08□□□□□ -0.8
Cxcl13O55038 Gm12029-201ENSMUST00000120073 832 ntBASIC10.08□□□□□ -0.8
Cxcl13O55038 Gm4726-201ENSMUST00000135604 736 ntBASIC10.08□□□□□ -0.8
Cxcl13O55038 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Cxcl13O55038 Gm6019-201ENSMUST00000148369 736 ntBASIC10.08□□□□□ -0.8
Cxcl13O55038 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC10.08□□□□□ -0.8
Cxcl13O55038 Gm17391-201ENSMUST00000171036 126 ntBASIC10.08□□□□□ -0.8
Cxcl13O55038 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms