Protein–RNA interactions for Protein: O08603

Raet1b, Retinoic acid early-inducible protein 1-beta, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1bO08603 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Raet1bO08603 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Raet1bO08603 Gm42943-201ENSMUST00000199676 3242 ntBASIC10.6□□□□□ -0.71
Raet1bO08603 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Raet1bO08603 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Raet1bO08603 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
Raet1bO08603 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Raet1bO08603 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Raet1bO08603 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Raet1bO08603 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Raet1bO08603 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Raet1bO08603 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC10.6□□□□□ -0.71
Raet1bO08603 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Raet1bO08603 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Raet1bO08603 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Raet1bO08603 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Raet1bO08603 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Raet1bO08603 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC10.6□□□□□ -0.71
Raet1bO08603 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC10.6□□□□□ -0.71
Raet1bO08603 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC10.6□□□□□ -0.71
Raet1bO08603 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC10.6□□□□□ -0.71
Raet1bO08603 Gm38241-201ENSMUST00000192641 898 ntBASIC10.6□□□□□ -0.71
Raet1bO08603 Gm32999-201ENSMUST00000192693 562 ntBASIC10.6□□□□□ -0.71
Raet1bO08603 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Raet1bO08603 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Raet1bO08603 AC153954.1-201ENSMUST00000216959 255 ntBASIC10.6□□□□□ -0.71
Raet1bO08603 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC10.6□□□□□ -0.71
Raet1bO08603 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Raet1bO08603 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Raet1bO08603 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Raet1bO08603 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Raet1bO08603 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Raet1bO08603 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Raet1bO08603 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC10.6□□□□□ -0.71
Raet1bO08603 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC10.6□□□□□ -0.71
Raet1bO08603 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Raet1bO08603 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Raet1bO08603 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Raet1bO08603 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC10.6□□□□□ -0.71
Raet1bO08603 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Raet1bO08603 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Raet1bO08603 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Raet1bO08603 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Raet1bO08603 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Raet1bO08603 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Raet1bO08603 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Raet1bO08603 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Raet1bO08603 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
Raet1bO08603 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC10.59□□□□□ -0.71
Raet1bO08603 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Raet1bO08603 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
Raet1bO08603 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC10.59□□□□□ -0.71
Raet1bO08603 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Raet1bO08603 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Raet1bO08603 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC10.59□□□□□ -0.71
Raet1bO08603 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Raet1bO08603 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC10.59□□□□□ -0.71
Raet1bO08603 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Raet1bO08603 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Raet1bO08603 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Raet1bO08603 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC10.59□□□□□ -0.71
Raet1bO08603 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
Raet1bO08603 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Raet1bO08603 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Raet1bO08603 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Raet1bO08603 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Raet1bO08603 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Raet1bO08603 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC10.59□□□□□ -0.71
Raet1bO08603 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC10.59□□□□□ -0.71
Raet1bO08603 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Raet1bO08603 Gm15276-201ENSMUST00000145953 498 ntBASIC10.59□□□□□ -0.71
Raet1bO08603 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Raet1bO08603 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Raet1bO08603 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Raet1bO08603 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Raet1bO08603 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC10.59□□□□□ -0.71
Raet1bO08603 Gm7783-201ENSMUST00000204795 781 ntBASIC10.59□□□□□ -0.71
Raet1bO08603 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Raet1bO08603 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Raet1bO08603 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
Raet1bO08603 Olfr582-201ENSMUST00000098212 960 ntBASIC10.59□□□□□ -0.71
Raet1bO08603 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Raet1bO08603 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC10.59□□□□□ -0.71
Raet1bO08603 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
Raet1bO08603 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Raet1bO08603 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC10.59□□□□□ -0.71
Raet1bO08603 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Raet1bO08603 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Raet1bO08603 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Raet1bO08603 Gm42913-201ENSMUST00000197936 1853 ntBASIC10.59□□□□□ -0.71
Raet1bO08603 AC129931.1-201ENSMUST00000228865 1861 ntBASIC10.59□□□□□ -0.71
Raet1bO08603 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Raet1bO08603 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Raet1bO08603 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Raet1bO08603 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC10.59□□□□□ -0.71
Raet1bO08603 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Raet1bO08603 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC10.59□□□□□ -0.71
Raet1bO08603 Arhgef3-204ENSMUST00000225949 3198 ntBASIC10.59□□□□□ -0.71
Raet1bO08603 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Raet1bO08603 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 79.1 ms