Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Pcdh1F7BJK1 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Pcdh1F7BJK1 Gm6754-201ENSMUST00000117124 913 ntBASIC10.76□□□□□ -0.69
Pcdh1F7BJK1 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC10.76□□□□□ -0.69
Pcdh1F7BJK1 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Pcdh1F7BJK1 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC10.76□□□□□ -0.69
Pcdh1F7BJK1 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Pcdh1F7BJK1 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC10.76□□□□□ -0.69
Pcdh1F7BJK1 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Pcdh1F7BJK1 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Pcdh1F7BJK1 Gm43433-201ENSMUST00000196573 481 ntBASIC10.76□□□□□ -0.69
Pcdh1F7BJK1 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC10.76□□□□□ -0.69
Pcdh1F7BJK1 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC10.76□□□□□ -0.69
Pcdh1F7BJK1 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC10.76□□□□□ -0.69
Pcdh1F7BJK1 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC10.76□□□□□ -0.69
Pcdh1F7BJK1 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC10.76□□□□□ -0.69
Pcdh1F7BJK1 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Pcdh1F7BJK1 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Pcdh1F7BJK1 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Pcdh1F7BJK1 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Pcdh1F7BJK1 Gm21136-201ENSMUST00000186812 2575 ntBASIC10.76□□□□□ -0.69
Pcdh1F7BJK1 Gm6605-201ENSMUST00000031488 2574 ntBASIC10.76□□□□□ -0.69
Pcdh1F7BJK1 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Pcdh1F7BJK1 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Pcdh1F7BJK1 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
Pcdh1F7BJK1 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Pcdh1F7BJK1 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Pcdh1F7BJK1 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Pcdh1F7BJK1 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Pcdh1F7BJK1 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Pcdh1F7BJK1 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Pcdh1F7BJK1 Gm12846-201ENSMUST00000120431 1373 ntBASIC10.76□□□□□ -0.69
Pcdh1F7BJK1 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Pcdh1F7BJK1 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Pcdh1F7BJK1 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Pcdh1F7BJK1 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Pcdh1F7BJK1 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Pcdh1F7BJK1 Gm44207-201ENSMUST00000204568 1424 ntBASIC10.75□□□□□ -0.69
Pcdh1F7BJK1 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Pcdh1F7BJK1 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Pcdh1F7BJK1 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Pcdh1F7BJK1 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Pcdh1F7BJK1 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC10.75□□□□□ -0.69
Pcdh1F7BJK1 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Pcdh1F7BJK1 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Pcdh1F7BJK1 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Pcdh1F7BJK1 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Pcdh1F7BJK1 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Pcdh1F7BJK1 Gm8146-201ENSMUST00000192106 1847 ntBASIC10.75□□□□□ -0.69
Pcdh1F7BJK1 Gm6211-201ENSMUST00000147973 4275 ntBASIC10.75□□□□□ -0.69
Pcdh1F7BJK1 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Pcdh1F7BJK1 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Pcdh1F7BJK1 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Pcdh1F7BJK1 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Pcdh1F7BJK1 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Pcdh1F7BJK1 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Pcdh1F7BJK1 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC10.75□□□□□ -0.69
Pcdh1F7BJK1 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC10.75□□□□□ -0.69
Pcdh1F7BJK1 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Pcdh1F7BJK1 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Pcdh1F7BJK1 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC10.75□□□□□ -0.69
Pcdh1F7BJK1 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Pcdh1F7BJK1 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Pcdh1F7BJK1 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC10.75□□□□□ -0.69
Pcdh1F7BJK1 Gm25261-201ENSMUST00000157416 134 ntBASIC10.75□□□□□ -0.69
Pcdh1F7BJK1 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC10.75□□□□□ -0.69
Pcdh1F7BJK1 Gm27023-201ENSMUST00000182372 285 ntBASIC10.75□□□□□ -0.69
Pcdh1F7BJK1 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC10.75□□□□□ -0.69
Pcdh1F7BJK1 Gm7619-201ENSMUST00000210649 1282 ntBASIC10.75□□□□□ -0.69
Pcdh1F7BJK1 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC10.75□□□□□ -0.69
Pcdh1F7BJK1 CT009738.1-201ENSMUST00000219031 809 ntBASIC10.75□□□□□ -0.69
Pcdh1F7BJK1 AC122459.1-201ENSMUST00000228373 885 ntBASIC10.75□□□□□ -0.69
Pcdh1F7BJK1 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Pcdh1F7BJK1 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Pcdh1F7BJK1 Snora73a-201ENSMUST00000082453 205 ntBASIC10.75□□□□□ -0.69
Pcdh1F7BJK1 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Pcdh1F7BJK1 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Pcdh1F7BJK1 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Pcdh1F7BJK1 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Pcdh1F7BJK1 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Pcdh1F7BJK1 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Pcdh1F7BJK1 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Pcdh1F7BJK1 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Pcdh1F7BJK1 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Pcdh1F7BJK1 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Pcdh1F7BJK1 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Pcdh1F7BJK1 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Pcdh1F7BJK1 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Pcdh1F7BJK1 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Pcdh1F7BJK1 4933406M09Rik-201ENSMUST00000162187 1768 ntAPPRIS P1 TSL 2 BASIC10.75□□□□□ -0.69
Pcdh1F7BJK1 Gm43242-201ENSMUST00000199507 1776 ntBASIC10.75□□□□□ -0.69
Pcdh1F7BJK1 Gm7642-201ENSMUST00000216345 1809 ntBASIC10.74□□□□□ -0.69
Pcdh1F7BJK1 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Pcdh1F7BJK1 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Pcdh1F7BJK1 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Pcdh1F7BJK1 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC10.74□□□□□ -0.69
Pcdh1F7BJK1 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Pcdh1F7BJK1 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Pcdh1F7BJK1 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Pcdh1F7BJK1 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC10.74□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms