Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 Gm45331-201ENSMUST00000209868 554 ntBASIC12.29□□□□□ -0.44
Atf6F6VAN0 Gm45598-202ENSMUST00000210719 986 ntBASIC12.29□□□□□ -0.44
Atf6F6VAN0 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Atf6F6VAN0 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC12.29□□□□□ -0.44
Atf6F6VAN0 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Atf6F6VAN0 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Atf6F6VAN0 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Atf6F6VAN0 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Atf6F6VAN0 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Atf6F6VAN0 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Atf6F6VAN0 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Atf6F6VAN0 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
Atf6F6VAN0 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Atf6F6VAN0 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Atf6F6VAN0 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Atf6F6VAN0 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Atf6F6VAN0 Gm42913-201ENSMUST00000197936 1853 ntBASIC12.29□□□□□ -0.44
Atf6F6VAN0 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC12.29□□□□□ -0.44
Atf6F6VAN0 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Atf6F6VAN0 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Atf6F6VAN0 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Atf6F6VAN0 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Atf6F6VAN0 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
Atf6F6VAN0 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Atf6F6VAN0 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Atf6F6VAN0 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Atf6F6VAN0 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Atf6F6VAN0 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Atf6F6VAN0 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Atf6F6VAN0 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Atf6F6VAN0 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Atf6F6VAN0 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Atf6F6VAN0 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC12.28□□□□□ -0.44
Atf6F6VAN0 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Atf6F6VAN0 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC12.28□□□□□ -0.44
Atf6F6VAN0 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Atf6F6VAN0 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Atf6F6VAN0 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Atf6F6VAN0 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC12.28□□□□□ -0.44
Atf6F6VAN0 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Atf6F6VAN0 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Atf6F6VAN0 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
Atf6F6VAN0 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Atf6F6VAN0 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC12.28□□□□□ -0.44
Atf6F6VAN0 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Atf6F6VAN0 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Atf6F6VAN0 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Atf6F6VAN0 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Atf6F6VAN0 Gm24255-201ENSMUST00000104481 128 ntBASIC12.28□□□□□ -0.44
Atf6F6VAN0 Gm12106-201ENSMUST00000116006 1200 ntBASIC12.28□□□□□ -0.44
Atf6F6VAN0 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Atf6F6VAN0 Gm14381-201ENSMUST00000122105 414 ntBASIC12.28□□□□□ -0.44
Atf6F6VAN0 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Atf6F6VAN0 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Atf6F6VAN0 Mir1938-201ENSMUST00000158746 100 ntBASIC12.28□□□□□ -0.44
Atf6F6VAN0 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC12.28□□□□□ -0.44
Atf6F6VAN0 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Atf6F6VAN0 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Atf6F6VAN0 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Atf6F6VAN0 Klk1b7-ps-201ENSMUST00000078897 448 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Atf6F6VAN0 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Atf6F6VAN0 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Atf6F6VAN0 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Atf6F6VAN0 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Atf6F6VAN0 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Atf6F6VAN0 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC12.28□□□□□ -0.44
Atf6F6VAN0 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Atf6F6VAN0 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Atf6F6VAN0 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC12.28□□□□□ -0.44
Atf6F6VAN0 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Atf6F6VAN0 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Atf6F6VAN0 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Atf6F6VAN0 Gm18983-201ENSMUST00000222884 2729 ntBASIC12.28□□□□□ -0.44
Atf6F6VAN0 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Atf6F6VAN0 4930433J02Rik-201ENSMUST00000194719 1386 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Atf6F6VAN0 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Atf6F6VAN0 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Atf6F6VAN0 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Atf6F6VAN0 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Atf6F6VAN0 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Atf6F6VAN0 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Atf6F6VAN0 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Atf6F6VAN0 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Atf6F6VAN0 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Atf6F6VAN0 AC122860.2-201ENSMUST00000217967 2671 ntBASIC12.27□□□□□ -0.44
Atf6F6VAN0 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Atf6F6VAN0 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Atf6F6VAN0 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.44
Atf6F6VAN0 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC12.27□□□□□ -0.44
Atf6F6VAN0 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Atf6F6VAN0 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Atf6F6VAN0 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Atf6F6VAN0 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC12.27□□□□□ -0.44
Atf6F6VAN0 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Atf6F6VAN0 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC12.27□□□□□ -0.45
Atf6F6VAN0 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Atf6F6VAN0 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Atf6F6VAN0 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Atf6F6VAN0 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC12.27□□□□□ -0.45
Atf6F6VAN0 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms