Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
Ube4aE9Q735 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ube4aE9Q735 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ube4aE9Q735 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ube4aE9Q735 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ube4aE9Q735 Gm23272-201ENSMUST00000104053 129 ntBASIC14.31□□□□□ -0.12
Ube4aE9Q735 Gm12795-201ENSMUST00000117594 539 ntBASIC14.31□□□□□ -0.12
Ube4aE9Q735 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ube4aE9Q735 Gm15523-201ENSMUST00000160463 439 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ube4aE9Q735 Rsph14-206ENSMUST00000166088 1203 ntAPPRIS P4 TSL 5 BASIC14.31□□□□□ -0.12
Ube4aE9Q735 Rsph14-207ENSMUST00000179546 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ube4aE9Q735 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC14.31□□□□□ -0.12
Ube4aE9Q735 Gm42518-201ENSMUST00000196277 938 ntBASIC14.31□□□□□ -0.12
Ube4aE9Q735 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ube4aE9Q735 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Ube4aE9Q735 Rsph14-201ENSMUST00000009214 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ube4aE9Q735 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ube4aE9Q735 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ube4aE9Q735 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Ube4aE9Q735 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Ube4aE9Q735 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ube4aE9Q735 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC14.31□□□□□ -0.12
Ube4aE9Q735 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Ube4aE9Q735 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ube4aE9Q735 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ube4aE9Q735 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ube4aE9Q735 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC14.3□□□□□ -0.12
Ube4aE9Q735 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ube4aE9Q735 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Ube4aE9Q735 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Ube4aE9Q735 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ube4aE9Q735 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Ube4aE9Q735 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ube4aE9Q735 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ube4aE9Q735 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ube4aE9Q735 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Ube4aE9Q735 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ube4aE9Q735 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ube4aE9Q735 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ube4aE9Q735 Gm4879-201ENSMUST00000122190 1272 ntBASIC14.3□□□□□ -0.12
Ube4aE9Q735 Gm18159-201ENSMUST00000174516 1070 ntBASIC14.3□□□□□ -0.12
Ube4aE9Q735 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Ube4aE9Q735 Mir6998-201ENSMUST00000183343 64 ntBASIC14.3□□□□□ -0.12
Ube4aE9Q735 Gm42657-201ENSMUST00000201746 211 ntBASIC14.3□□□□□ -0.12
Ube4aE9Q735 Gm40652-201ENSMUST00000218944 895 ntTSL 5 BASIC14.3□□□□□ -0.12
Ube4aE9Q735 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC14.3□□□□□ -0.12
Ube4aE9Q735 AC118639.2-201ENSMUST00000226289 223 ntBASIC14.3□□□□□ -0.12
Ube4aE9Q735 Prrxl1-205ENSMUST00000228878 723 ntBASIC14.3□□□□□ -0.12
Ube4aE9Q735 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
Ube4aE9Q735 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Ube4aE9Q735 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ube4aE9Q735 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ube4aE9Q735 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ube4aE9Q735 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
Ube4aE9Q735 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ube4aE9Q735 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ube4aE9Q735 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ube4aE9Q735 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ube4aE9Q735 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Ube4aE9Q735 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ube4aE9Q735 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Ube4aE9Q735 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ube4aE9Q735 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Ube4aE9Q735 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ube4aE9Q735 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ube4aE9Q735 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ube4aE9Q735 Gm13182-201ENSMUST00000122241 312 ntBASIC14.29□□□□□ -0.12
Ube4aE9Q735 Mir1956-201ENSMUST00000157748 65 ntBASIC14.29□□□□□ -0.12
Ube4aE9Q735 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ube4aE9Q735 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ube4aE9Q735 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC14.29□□□□□ -0.12
Ube4aE9Q735 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
Ube4aE9Q735 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ube4aE9Q735 1110019B22Rik-202ENSMUST00000218396 989 ntTSL 5 BASIC14.29□□□□□ -0.12
Ube4aE9Q735 Gm9661-201ENSMUST00000221611 1122 ntBASIC14.29□□□□□ -0.12
Ube4aE9Q735 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC14.29□□□□□ -0.12
Ube4aE9Q735 AC164437.3-201ENSMUST00000228323 347 ntBASIC14.29□□□□□ -0.12
Ube4aE9Q735 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ube4aE9Q735 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ube4aE9Q735 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ube4aE9Q735 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ube4aE9Q735 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ube4aE9Q735 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ube4aE9Q735 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ube4aE9Q735 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC14.29□□□□□ -0.12
Ube4aE9Q735 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ube4aE9Q735 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ube4aE9Q735 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ube4aE9Q735 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
Ube4aE9Q735 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ube4aE9Q735 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ube4aE9Q735 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ube4aE9Q735 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ube4aE9Q735 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Ube4aE9Q735 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ube4aE9Q735 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ube4aE9Q735 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ube4aE9Q735 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ube4aE9Q735 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Ube4aE9Q735 Gm26013-201ENSMUST00000104404 119 ntBASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 281.2 ms