Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Col6a3E9PWQ3 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Col6a3E9PWQ3 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC11.56□□□□□ -0.56
Col6a3E9PWQ3 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Col6a3E9PWQ3 Gm8038-201ENSMUST00000164674 2044 ntBASIC11.56□□□□□ -0.56
Col6a3E9PWQ3 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Col6a3E9PWQ3 H2-Pb-201ENSMUST00000172731 531 ntBASIC11.55□□□□□ -0.56
Col6a3E9PWQ3 Gm20467-201ENSMUST00000172872 994 ntTSL 3 BASIC11.55□□□□□ -0.56
Col6a3E9PWQ3 Ube2i-214ENSMUST00000174216 1144 ntTSL 2 BASIC11.55□□□□□ -0.56
Col6a3E9PWQ3 Gm29261-201ENSMUST00000188535 678 ntTSL 5 BASIC11.55□□□□□ -0.56
Col6a3E9PWQ3 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Col6a3E9PWQ3 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Col6a3E9PWQ3 1700036A12Rik-202ENSMUST00000190053 1828 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Col6a3E9PWQ3 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Col6a3E9PWQ3 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Col6a3E9PWQ3 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Col6a3E9PWQ3 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Col6a3E9PWQ3 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Col6a3E9PWQ3 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Col6a3E9PWQ3 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC11.55□□□□□ -0.56
Col6a3E9PWQ3 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Col6a3E9PWQ3 Gm13758-201ENSMUST00000118699 743 ntBASIC11.55□□□□□ -0.56
Col6a3E9PWQ3 n-R5s154-201ENSMUST00000122513 108 ntBASIC11.55□□□□□ -0.56
Col6a3E9PWQ3 Grip1os1-201ENSMUST00000126965 1084 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Col6a3E9PWQ3 A530010F05Rik-201ENSMUST00000146845 1020 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Col6a3E9PWQ3 Mir6396-201ENSMUST00000183603 111 ntBASIC11.55□□□□□ -0.56
Col6a3E9PWQ3 1700019D03Rik-207ENSMUST00000191441 638 ntAPPRIS P1 TSL 3 BASIC11.55□□□□□ -0.56
Col6a3E9PWQ3 Gm9531-201ENSMUST00000055820 638 ntTSL 3 BASIC11.55□□□□□ -0.56
Col6a3E9PWQ3 Gm8174-201ENSMUST00000064353 1001 ntBASIC11.55□□□□□ -0.56
Col6a3E9PWQ3 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC11.55□□□□□ -0.56
Col6a3E9PWQ3 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Col6a3E9PWQ3 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Col6a3E9PWQ3 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Col6a3E9PWQ3 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Col6a3E9PWQ3 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Col6a3E9PWQ3 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Col6a3E9PWQ3 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Col6a3E9PWQ3 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Col6a3E9PWQ3 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Col6a3E9PWQ3 Scp2-202ENSMUST00000106701 772 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Col6a3E9PWQ3 1700028P15Rik-202ENSMUST00000139894 856 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Col6a3E9PWQ3 Milr1-206ENSMUST00000182896 918 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Col6a3E9PWQ3 Milr1-207ENSMUST00000182908 811 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Col6a3E9PWQ3 Gm19918-201ENSMUST00000194858 400 ntBASIC11.55□□□□□ -0.56
Col6a3E9PWQ3 4933402C05Rik-201ENSMUST00000208189 1035 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Col6a3E9PWQ3 Gm31786-201ENSMUST00000212305 564 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Col6a3E9PWQ3 Gm9869-201ENSMUST00000063858 375 ntTSL 5 BASIC11.55□□□□□ -0.56
Col6a3E9PWQ3 Kcnma1-207ENSMUST00000172099 3354 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Col6a3E9PWQ3 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Col6a3E9PWQ3 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Col6a3E9PWQ3 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Col6a3E9PWQ3 Ms4a6b-201ENSMUST00000025580 1687 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Col6a3E9PWQ3 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Col6a3E9PWQ3 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC11.54□□□□□ -0.56
Col6a3E9PWQ3 Plac9b-201ENSMUST00000100809 388 ntTSL 2 BASIC11.54□□□□□ -0.56
Col6a3E9PWQ3 Gm15132-201ENSMUST00000118581 652 ntBASIC11.54□□□□□ -0.56
Col6a3E9PWQ3 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC11.54□□□□□ -0.56
Col6a3E9PWQ3 Faap24-203ENSMUST00000154597 831 ntAPPRIS P1 TSL 3 BASIC11.54□□□□□ -0.56
Col6a3E9PWQ3 Gm28065-201ENSMUST00000185290 833 ntTSL 3 BASIC11.54□□□□□ -0.56
Col6a3E9PWQ3 Gm2328-201ENSMUST00000193525 535 ntBASIC11.54□□□□□ -0.56
Col6a3E9PWQ3 Il18-203ENSMUST00000213916 885 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Col6a3E9PWQ3 Gm12216-207ENSMUST00000220191 1073 ntAPPRIS P5 TSL 5 BASIC11.54□□□□□ -0.56
Col6a3E9PWQ3 Gm35298-201ENSMUST00000222719 430 ntTSL 5 BASIC11.54□□□□□ -0.56
Col6a3E9PWQ3 AC154407.1-201ENSMUST00000226777 526 ntBASIC11.54□□□□□ -0.56
Col6a3E9PWQ3 Naca-201ENSMUST00000073868 885 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Col6a3E9PWQ3 Gm5148-202ENSMUST00000099128 1098 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Col6a3E9PWQ3 Uros-204ENSMUST00000106146 1483 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Col6a3E9PWQ3 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Col6a3E9PWQ3 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Col6a3E9PWQ3 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Col6a3E9PWQ3 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Col6a3E9PWQ3 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Col6a3E9PWQ3 Gm12626-201ENSMUST00000117339 1983 ntBASIC11.54□□□□□ -0.56
Col6a3E9PWQ3 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Col6a3E9PWQ3 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Col6a3E9PWQ3 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Col6a3E9PWQ3 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Col6a3E9PWQ3 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Col6a3E9PWQ3 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Col6a3E9PWQ3 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Col6a3E9PWQ3 Gm11951-201ENSMUST00000116005 431 ntBASIC11.54□□□□□ -0.56
Col6a3E9PWQ3 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Col6a3E9PWQ3 Gm18733-202ENSMUST00000174447 401 ntBASIC11.54□□□□□ -0.56
Col6a3E9PWQ3 Ccdc28a-205ENSMUST00000174592 882 ntTSL 5 BASIC11.54□□□□□ -0.56
Col6a3E9PWQ3 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC11.54□□□□□ -0.56
Col6a3E9PWQ3 Gm6695-201ENSMUST00000177264 1172 ntBASIC11.54□□□□□ -0.56
Col6a3E9PWQ3 Olfr1358-201ENSMUST00000204477 1064 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Col6a3E9PWQ3 Fam228a-203ENSMUST00000220978 861 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Col6a3E9PWQ3 3830406C13Rik-213ENSMUST00000225294 1191 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Col6a3E9PWQ3 Supt4a-201ENSMUST00000093955 706 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Col6a3E9PWQ3 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Col6a3E9PWQ3 Gm10689-201ENSMUST00000098864 432 ntBASIC11.54□□□□□ -0.56
Col6a3E9PWQ3 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Col6a3E9PWQ3 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Col6a3E9PWQ3 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Col6a3E9PWQ3 Gm31816-202ENSMUST00000209591 1332 ntTSL 5 BASIC11.54□□□□□ -0.56
Col6a3E9PWQ3 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Col6a3E9PWQ3 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Col6a3E9PWQ3 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC11.54□□□□□ -0.56
Col6a3E9PWQ3 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms