Protein–RNA interactions for Protein: Q9D0E3

Lysmd1, LysM and putative peptidoglycan-binding domain-containing protein 1, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd1Q9D0E3 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Lysmd1Q9D0E3 AC093022.4-203ENSMUST00000228523 2657 ntBASIC12.68□□□□□ -0.38
Lysmd1Q9D0E3 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Lysmd1Q9D0E3 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Lysmd1Q9D0E3 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Lysmd1Q9D0E3 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Lysmd1Q9D0E3 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lysmd1Q9D0E3 Gm45199-201ENSMUST00000207640 1507 ntBASIC12.67□□□□□ -0.38
Lysmd1Q9D0E3 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lysmd1Q9D0E3 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Lysmd1Q9D0E3 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC12.67□□□□□ -0.38
Lysmd1Q9D0E3 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lysmd1Q9D0E3 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lysmd1Q9D0E3 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lysmd1Q9D0E3 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lysmd1Q9D0E3 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lysmd1Q9D0E3 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lysmd1Q9D0E3 Ppp2r2cos-201ENSMUST00000152862 1491 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Lysmd1Q9D0E3 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lysmd1Q9D0E3 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Lysmd1Q9D0E3 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Lysmd1Q9D0E3 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC12.67□□□□□ -0.38
Lysmd1Q9D0E3 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC12.67□□□□□ -0.38
Lysmd1Q9D0E3 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Lysmd1Q9D0E3 Gm8659-201ENSMUST00000120024 1084 ntBASIC12.67□□□□□ -0.38
Lysmd1Q9D0E3 Gm14524-201ENSMUST00000121066 683 ntBASIC12.67□□□□□ -0.38
Lysmd1Q9D0E3 6430531B16Rik-202ENSMUST00000121412 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lysmd1Q9D0E3 Gm27191-201ENSMUST00000145973 448 ntTSL 3 BASIC12.67□□□□□ -0.38
Lysmd1Q9D0E3 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Lysmd1Q9D0E3 Gm10807-201ENSMUST00000177134 795 ntBASIC12.67□□□□□ -0.38
Lysmd1Q9D0E3 AU020206-201ENSMUST00000181224 656 ntTSL 2 BASIC12.67□□□□□ -0.38
Lysmd1Q9D0E3 1700109G14Rik-202ENSMUST00000188538 754 ntTSL 3 BASIC12.67□□□□□ -0.38
Lysmd1Q9D0E3 Gm9523-201ENSMUST00000199146 1159 ntBASIC12.67□□□□□ -0.38
Lysmd1Q9D0E3 Gm2566-201ENSMUST00000201267 431 ntBASIC12.67□□□□□ -0.38
Lysmd1Q9D0E3 3930402G23Rik-202ENSMUST00000208615 581 ntTSL 3 BASIC12.67□□□□□ -0.38
Lysmd1Q9D0E3 AC140314.1-201ENSMUST00000219549 554 ntBASIC12.67□□□□□ -0.38
Lysmd1Q9D0E3 AC107711.3-201ENSMUST00000228939 1035 ntBASIC12.67□□□□□ -0.38
Lysmd1Q9D0E3 Rps14-201ENSMUST00000025511 683 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lysmd1Q9D0E3 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC12.67□□□□□ -0.38
Lysmd1Q9D0E3 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lysmd1Q9D0E3 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lysmd1Q9D0E3 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lysmd1Q9D0E3 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lysmd1Q9D0E3 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lysmd1Q9D0E3 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Lysmd1Q9D0E3 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Lysmd1Q9D0E3 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lysmd1Q9D0E3 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lysmd1Q9D0E3 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Lysmd1Q9D0E3 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lysmd1Q9D0E3 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Lysmd1Q9D0E3 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lysmd1Q9D0E3 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lysmd1Q9D0E3 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Lysmd1Q9D0E3 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
Lysmd1Q9D0E3 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Lysmd1Q9D0E3 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC12.66□□□□□ -0.38
Lysmd1Q9D0E3 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lysmd1Q9D0E3 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lysmd1Q9D0E3 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lysmd1Q9D0E3 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lysmd1Q9D0E3 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lysmd1Q9D0E3 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lysmd1Q9D0E3 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Lysmd1Q9D0E3 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lysmd1Q9D0E3 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Lysmd1Q9D0E3 Gm44106-201ENSMUST00000203153 1599 ntBASIC12.66□□□□□ -0.38
Lysmd1Q9D0E3 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lysmd1Q9D0E3 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Lysmd1Q9D0E3 Dpm1-202ENSMUST00000109193 1076 ntTSL 5 BASIC12.66□□□□□ -0.38
Lysmd1Q9D0E3 Trub2-203ENSMUST00000113807 1035 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Lysmd1Q9D0E3 Nhp2-202ENSMUST00000127405 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lysmd1Q9D0E3 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC12.66□□□□□ -0.38
Lysmd1Q9D0E3 H2afy3-201ENSMUST00000151919 1112 ntBASIC12.66□□□□□ -0.38
Lysmd1Q9D0E3 Eif4e1b-210ENSMUST00000152204 859 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Lysmd1Q9D0E3 Gm26047-201ENSMUST00000157308 113 ntBASIC12.66□□□□□ -0.38
Lysmd1Q9D0E3 Gm5808-201ENSMUST00000178090 357 ntBASIC12.66□□□□□ -0.38
Lysmd1Q9D0E3 Gm26725-201ENSMUST00000180652 1113 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Lysmd1Q9D0E3 Mir6934-201ENSMUST00000183965 62 ntBASIC12.66□□□□□ -0.38
Lysmd1Q9D0E3 Gm26047-202ENSMUST00000198840 115 ntBASIC12.66□□□□□ -0.38
Lysmd1Q9D0E3 Ube2d3-216ENSMUST00000199613 738 ntAPPRIS P2 TSL 3 BASIC12.66□□□□□ -0.38
Lysmd1Q9D0E3 Chn2-210ENSMUST00000203091 755 ntTSL 5 BASIC12.66□□□□□ -0.38
Lysmd1Q9D0E3 AC163646.3-201ENSMUST00000228879 772 ntBASIC12.66□□□□□ -0.38
Lysmd1Q9D0E3 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lysmd1Q9D0E3 n-R5s71-201ENSMUST00000093668 119 ntBASIC12.66□□□□□ -0.38
Lysmd1Q9D0E3 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lysmd1Q9D0E3 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lysmd1Q9D0E3 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC12.66□□□□□ -0.38
Lysmd1Q9D0E3 AC164702.1-201ENSMUST00000220135 2212 ntBASIC12.66□□□□□ -0.38
Lysmd1Q9D0E3 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lysmd1Q9D0E3 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Lysmd1Q9D0E3 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lysmd1Q9D0E3 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Lysmd1Q9D0E3 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lysmd1Q9D0E3 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lysmd1Q9D0E3 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
Lysmd1Q9D0E3 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lysmd1Q9D0E3 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC12.66□□□□□ -0.38
Lysmd1Q9D0E3 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Lysmd1Q9D0E3 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms