Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trim13Q9CYB0 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trim13Q9CYB0 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trim13Q9CYB0 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trim13Q9CYB0 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trim13Q9CYB0 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trim13Q9CYB0 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trim13Q9CYB0 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC11.07□□□□□ -0.64
Trim13Q9CYB0 Tro-203ENSMUST00000112709 6610 ntAPPRIS P3 TSL 5 BASIC11.07□□□□□ -0.64
Trim13Q9CYB0 Gm45342-201ENSMUST00000210903 1363 ntBASIC11.07□□□□□ -0.64
Trim13Q9CYB0 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC11.07□□□□□ -0.64
Trim13Q9CYB0 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trim13Q9CYB0 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Trim13Q9CYB0 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Trim13Q9CYB0 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trim13Q9CYB0 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trim13Q9CYB0 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trim13Q9CYB0 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trim13Q9CYB0 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trim13Q9CYB0 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC11.07□□□□□ -0.64
Trim13Q9CYB0 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC11.07□□□□□ -0.64
Trim13Q9CYB0 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC11.07□□□□□ -0.64
Trim13Q9CYB0 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC11.07□□□□□ -0.64
Trim13Q9CYB0 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Trim13Q9CYB0 Gm8018-201ENSMUST00000173536 789 ntBASIC11.07□□□□□ -0.64
Trim13Q9CYB0 Gm4271-201ENSMUST00000174444 973 ntBASIC11.07□□□□□ -0.64
Trim13Q9CYB0 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Trim13Q9CYB0 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trim13Q9CYB0 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC11.07□□□□□ -0.64
Trim13Q9CYB0 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Trim13Q9CYB0 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Trim13Q9CYB0 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trim13Q9CYB0 Zfp217-201ENSMUST00000063710 5685 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trim13Q9CYB0 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Trim13Q9CYB0 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trim13Q9CYB0 Col11a1-201ENSMUST00000092155 7667 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trim13Q9CYB0 Gm7789-202ENSMUST00000211273 1400 ntBASIC11.07□□□□□ -0.64
Trim13Q9CYB0 Kat6b-201ENSMUST00000069648 7649 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Trim13Q9CYB0 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC11.07□□□□□ -0.64
Trim13Q9CYB0 Zbtb21-203ENSMUST00000113734 6010 ntAPPRIS P4 TSL 2 BASIC11.07□□□□□ -0.64
Trim13Q9CYB0 Cmya5-201ENSMUST00000062122 11850 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trim13Q9CYB0 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trim13Q9CYB0 Gm13050-201ENSMUST00000122149 1345 ntBASIC11.07□□□□□ -0.64
Trim13Q9CYB0 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trim13Q9CYB0 Ptprg-201ENSMUST00000022264 9213 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trim13Q9CYB0 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Trim13Q9CYB0 Fgl2-201ENSMUST00000035799 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trim13Q9CYB0 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trim13Q9CYB0 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trim13Q9CYB0 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC11.06□□□□□ -0.64
Trim13Q9CYB0 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Trim13Q9CYB0 Abl2-202ENSMUST00000166172 10151 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trim13Q9CYB0 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trim13Q9CYB0 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trim13Q9CYB0 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Trim13Q9CYB0 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Trim13Q9CYB0 Tfam-201ENSMUST00000092430 4167 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trim13Q9CYB0 Gm38116-201ENSMUST00000193873 1533 ntBASIC11.06□□□□□ -0.64
Trim13Q9CYB0 Loxhd1-202ENSMUST00000096547 6595 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trim13Q9CYB0 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trim13Q9CYB0 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Trim13Q9CYB0 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trim13Q9CYB0 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC11.06□□□□□ -0.64
Trim13Q9CYB0 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Trim13Q9CYB0 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC11.06□□□□□ -0.64
Trim13Q9CYB0 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trim13Q9CYB0 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC11.06□□□□□ -0.64
Trim13Q9CYB0 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC11.06□□□□□ -0.64
Trim13Q9CYB0 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC11.06□□□□□ -0.64
Trim13Q9CYB0 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC11.06□□□□□ -0.64
Trim13Q9CYB0 4921527H02Rik-201ENSMUST00000196028 246 ntBASIC11.06□□□□□ -0.64
Trim13Q9CYB0 Gm29705-201ENSMUST00000212598 474 ntBASIC11.06□□□□□ -0.64
Trim13Q9CYB0 Gm5186-201ENSMUST00000218781 920 ntBASIC11.06□□□□□ -0.64
Trim13Q9CYB0 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trim13Q9CYB0 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trim13Q9CYB0 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trim13Q9CYB0 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trim13Q9CYB0 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trim13Q9CYB0 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trim13Q9CYB0 Spata31d1a-203ENSMUST00000224982 5325 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Trim13Q9CYB0 Chrm1-202ENSMUST00000163785 6271 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trim13Q9CYB0 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trim13Q9CYB0 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC11.06□□□□□ -0.64
Trim13Q9CYB0 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Trim13Q9CYB0 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Trim13Q9CYB0 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Trim13Q9CYB0 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trim13Q9CYB0 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Trim13Q9CYB0 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Trim13Q9CYB0 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trim13Q9CYB0 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trim13Q9CYB0 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Trim13Q9CYB0 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Trim13Q9CYB0 Gm43760-201ENSMUST00000202120 3015 ntBASIC11.06□□□□□ -0.64
Trim13Q9CYB0 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trim13Q9CYB0 Pcdhga10-201ENSMUST00000193404 4732 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trim13Q9CYB0 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trim13Q9CYB0 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trim13Q9CYB0 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trim13Q9CYB0 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms