Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Gm15003-201ENSMUST00000118884 446 ntBASIC12.22□□□□□ -0.45
Cldnd1Q9CQX5 Gm12036-201ENSMUST00000120008 530 ntBASIC12.22□□□□□ -0.45
Cldnd1Q9CQX5 Gm11244-201ENSMUST00000121243 237 ntBASIC12.22□□□□□ -0.45
Cldnd1Q9CQX5 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Cldnd1Q9CQX5 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC12.22□□□□□ -0.45
Cldnd1Q9CQX5 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Cldnd1Q9CQX5 Gm21844-201ENSMUST00000178699 663 ntTSL 3 BASIC12.22□□□□□ -0.45
Cldnd1Q9CQX5 Ighv1-2-201ENSMUST00000195325 378 ntBASIC12.22□□□□□ -0.45
Cldnd1Q9CQX5 Gm5870-201ENSMUST00000196461 282 ntBASIC12.22□□□□□ -0.45
Cldnd1Q9CQX5 Fkbp6-204ENSMUST00000201791 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cldnd1Q9CQX5 Gm34655-202ENSMUST00000215259 877 ntTSL 3 BASIC12.22□□□□□ -0.45
Cldnd1Q9CQX5 Gm7940-201ENSMUST00000218195 769 ntBASIC12.22□□□□□ -0.45
Cldnd1Q9CQX5 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Cldnd1Q9CQX5 CT009546.1-201ENSMUST00000222573 1120 ntBASIC12.22□□□□□ -0.45
Cldnd1Q9CQX5 AC113282.2-201ENSMUST00000224012 945 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Cldnd1Q9CQX5 AC113282.3-201ENSMUST00000224757 942 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Cldnd1Q9CQX5 Pcgf5-204ENSMUST00000224772 1266 ntAPPRIS ALT1 BASIC12.22□□□□□ -0.45
Cldnd1Q9CQX5 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cldnd1Q9CQX5 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cldnd1Q9CQX5 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cldnd1Q9CQX5 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cldnd1Q9CQX5 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cldnd1Q9CQX5 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cldnd1Q9CQX5 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Cldnd1Q9CQX5 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cldnd1Q9CQX5 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cldnd1Q9CQX5 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cldnd1Q9CQX5 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cldnd1Q9CQX5 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Cldnd1Q9CQX5 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cldnd1Q9CQX5 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cldnd1Q9CQX5 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Cldnd1Q9CQX5 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Cldnd1Q9CQX5 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cldnd1Q9CQX5 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC12.21□□□□□ -0.45
Cldnd1Q9CQX5 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cldnd1Q9CQX5 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cldnd1Q9CQX5 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cldnd1Q9CQX5 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Cldnd1Q9CQX5 Cog3-203ENSMUST00000227473 4197 ntBASIC12.21□□□□□ -0.45
Cldnd1Q9CQX5 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cldnd1Q9CQX5 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cldnd1Q9CQX5 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cldnd1Q9CQX5 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cldnd1Q9CQX5 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cldnd1Q9CQX5 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC12.21□□□□□ -0.45
Cldnd1Q9CQX5 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Cldnd1Q9CQX5 Sgca-202ENSMUST00000103162 1724 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Cldnd1Q9CQX5 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Cldnd1Q9CQX5 Tomm5-201ENSMUST00000107807 442 ntTSL 2 BASIC12.21□□□□□ -0.45
Cldnd1Q9CQX5 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.45
Cldnd1Q9CQX5 Gm11560-201ENSMUST00000117567 948 ntBASIC12.21□□□□□ -0.45
Cldnd1Q9CQX5 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC12.21□□□□□ -0.45
Cldnd1Q9CQX5 Gm25604-201ENSMUST00000158359 133 ntBASIC12.21□□□□□ -0.45
Cldnd1Q9CQX5 Gm8459-201ENSMUST00000162504 760 ntBASIC12.21□□□□□ -0.45
Cldnd1Q9CQX5 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.45
Cldnd1Q9CQX5 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC12.21□□□□□ -0.45
Cldnd1Q9CQX5 Mmp7-201ENSMUST00000018767 1068 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cldnd1Q9CQX5 Gm35025-203ENSMUST00000193519 634 ntTSL 3 BASIC12.21□□□□□ -0.45
Cldnd1Q9CQX5 Gm43695-201ENSMUST00000196545 196 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Cldnd1Q9CQX5 Tmbim7-204ENSMUST00000198739 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cldnd1Q9CQX5 Gm3433-201ENSMUST00000210149 1058 ntBASIC12.21□□□□□ -0.45
Cldnd1Q9CQX5 Gm6390-201ENSMUST00000215034 589 ntBASIC12.21□□□□□ -0.45
Cldnd1Q9CQX5 Gm19046-201ENSMUST00000221263 1298 ntBASIC12.21□□□□□ -0.45
Cldnd1Q9CQX5 Mitd1-201ENSMUST00000027257 1231 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cldnd1Q9CQX5 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cldnd1Q9CQX5 2310057N15Rik-201ENSMUST00000054223 1028 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Cldnd1Q9CQX5 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cldnd1Q9CQX5 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC12.21□□□□□ -0.45
Cldnd1Q9CQX5 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cldnd1Q9CQX5 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Cldnd1Q9CQX5 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Cldnd1Q9CQX5 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cldnd1Q9CQX5 Gm4900-201ENSMUST00000222046 1628 ntBASIC12.21□□□□□ -0.46
Cldnd1Q9CQX5 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Cldnd1Q9CQX5 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cldnd1Q9CQX5 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cldnd1Q9CQX5 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cldnd1Q9CQX5 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC12.21□□□□□ -0.46
Cldnd1Q9CQX5 Matn2-206ENSMUST00000228570 2798 ntBASIC12.21□□□□□ -0.46
Cldnd1Q9CQX5 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Cldnd1Q9CQX5 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Cldnd1Q9CQX5 Gm19680-201ENSMUST00000095050 1513 ntBASIC12.21□□□□□ -0.46
Cldnd1Q9CQX5 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cldnd1Q9CQX5 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Cldnd1Q9CQX5 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC12.2□□□□□ -0.46
Cldnd1Q9CQX5 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Cldnd1Q9CQX5 Zfp1-202ENSMUST00000211926 1409 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cldnd1Q9CQX5 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Cldnd1Q9CQX5 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Cldnd1Q9CQX5 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Cldnd1Q9CQX5 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cldnd1Q9CQX5 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cldnd1Q9CQX5 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC12.2□□□□□ -0.46
Cldnd1Q9CQX5 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC12.2□□□□□ -0.46
Cldnd1Q9CQX5 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cldnd1Q9CQX5 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cldnd1Q9CQX5 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cldnd1Q9CQX5 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cldnd1Q9CQX5 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms