Protein–RNA interactions for Protein: Q99PV0

Prpf8, Pre-mRNA-processing-splicing factor 8, mousemouse

Known RBP Predictions only

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf8Q99PV0 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Prpf8Q99PV0 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Prpf8Q99PV0 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC9.83□□□□□ -0.84
Prpf8Q99PV0 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Prpf8Q99PV0 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Prpf8Q99PV0 Bicd1-203ENSMUST00000111513 4049 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Prpf8Q99PV0 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Prpf8Q99PV0 AC151895.1-201ENSMUST00000219025 1742 ntBASIC9.83□□□□□ -0.84
Prpf8Q99PV0 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC9.83□□□□□ -0.84
Prpf8Q99PV0 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC9.83□□□□□ -0.84
Prpf8Q99PV0 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC9.83□□□□□ -0.84
Prpf8Q99PV0 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
Prpf8Q99PV0 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Prpf8Q99PV0 Gm22711-201ENSMUST00000116890 133 ntBASIC9.83□□□□□ -0.84
Prpf8Q99PV0 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC9.83□□□□□ -0.84
Prpf8Q99PV0 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC9.83□□□□□ -0.84
Prpf8Q99PV0 Gm29499-201ENSMUST00000189151 486 ntBASIC9.83□□□□□ -0.84
Prpf8Q99PV0 Gm28329-201ENSMUST00000191208 689 ntBASIC9.83□□□□□ -0.84
Prpf8Q99PV0 Gm29171-201ENSMUST00000191397 486 ntBASIC9.83□□□□□ -0.84
Prpf8Q99PV0 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC9.83□□□□□ -0.84
Prpf8Q99PV0 Fabp6-201ENSMUST00000020672 479 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Prpf8Q99PV0 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Prpf8Q99PV0 Slc1a4-202ENSMUST00000109594 3926 ntAPPRIS P2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Prpf8Q99PV0 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Prpf8Q99PV0 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Prpf8Q99PV0 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
Prpf8Q99PV0 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
Prpf8Q99PV0 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Prpf8Q99PV0 Wbp1l-204ENSMUST00000138302 3900 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
Prpf8Q99PV0 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC9.83□□□□□ -0.84
Prpf8Q99PV0 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Prpf8Q99PV0 Cd2bp2-202ENSMUST00000166791 3284 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Prpf8Q99PV0 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC9.83□□□□□ -0.84
Prpf8Q99PV0 Zzef1-201ENSMUST00000069395 11150 ntAPPRIS P2 TSL 5 BASIC9.83□□□□□ -0.84
Prpf8Q99PV0 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Prpf8Q99PV0 Zkscan3-207ENSMUST00000223831 2101 ntBASIC9.83□□□□□ -0.84
Prpf8Q99PV0 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Prpf8Q99PV0 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Prpf8Q99PV0 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Prpf8Q99PV0 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Prpf8Q99PV0 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC9.83□□□□□ -0.84
Prpf8Q99PV0 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC9.83□□□□□ -0.84
Prpf8Q99PV0 Gm15725-201ENSMUST00000119947 1090 ntBASIC9.83□□□□□ -0.84
Prpf8Q99PV0 Gm23045-201ENSMUST00000175041 96 ntBASIC9.83□□□□□ -0.84
Prpf8Q99PV0 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC9.83□□□□□ -0.84
Prpf8Q99PV0 Gm8492-201ENSMUST00000182375 987 ntBASIC9.83□□□□□ -0.84
Prpf8Q99PV0 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC9.83□□□□□ -0.84
Prpf8Q99PV0 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC9.83□□□□□ -0.84
Prpf8Q99PV0 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC9.83□□□□□ -0.84
Prpf8Q99PV0 Gm6145-204ENSMUST00000210902 1266 ntTSL 5 BASIC9.83□□□□□ -0.84
Prpf8Q99PV0 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Prpf8Q99PV0 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Prpf8Q99PV0 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Prpf8Q99PV0 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC9.83□□□□□ -0.84
Prpf8Q99PV0 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Prpf8Q99PV0 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC9.83□□□□□ -0.84
Prpf8Q99PV0 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Prpf8Q99PV0 Klhl18-205ENSMUST00000198400 4638 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Prpf8Q99PV0 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Prpf8Q99PV0 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Prpf8Q99PV0 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Prpf8Q99PV0 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Prpf8Q99PV0 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Prpf8Q99PV0 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC9.82□□□□□ -0.84
Prpf8Q99PV0 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Prpf8Q99PV0 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
Prpf8Q99PV0 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Prpf8Q99PV0 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Prpf8Q99PV0 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Prpf8Q99PV0 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Prpf8Q99PV0 Cdkl2-201ENSMUST00000069937 3976 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Prpf8Q99PV0 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Prpf8Q99PV0 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC9.82□□□□□ -0.84
Prpf8Q99PV0 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Prpf8Q99PV0 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC9.82□□□□□ -0.84
Prpf8Q99PV0 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Prpf8Q99PV0 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
Prpf8Q99PV0 Gm42840-201ENSMUST00000200303 2251 ntBASIC9.82□□□□□ -0.84
Prpf8Q99PV0 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Prpf8Q99PV0 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Prpf8Q99PV0 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC9.82□□□□□ -0.84
Prpf8Q99PV0 n-R5s64-201ENSMUST00000102019 119 ntBASIC9.82□□□□□ -0.84
Prpf8Q99PV0 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC9.82□□□□□ -0.84
Prpf8Q99PV0 Gm16323-201ENSMUST00000134920 556 ntTSL 3 BASIC9.82□□□□□ -0.84
Prpf8Q99PV0 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Prpf8Q99PV0 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC9.82□□□□□ -0.84
Prpf8Q99PV0 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Prpf8Q99PV0 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Prpf8Q99PV0 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Prpf8Q99PV0 AC093022.5-201ENSMUST00000226841 1079 ntBASIC9.82□□□□□ -0.84
Prpf8Q99PV0 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Prpf8Q99PV0 Snora73b-201ENSMUST00000083419 205 ntBASIC9.82□□□□□ -0.84
Prpf8Q99PV0 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC9.82□□□□□ -0.84
Prpf8Q99PV0 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
Prpf8Q99PV0 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC9.82□□□□□ -0.84
Prpf8Q99PV0 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC9.82□□□□□ -0.84
Prpf8Q99PV0 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC9.82□□□□□ -0.84
Prpf8Q99PV0 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Prpf8Q99PV0 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Prpf8Q99PV0 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms