Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim16Q99PP9 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim16Q99PP9 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim16Q99PP9 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trim16Q99PP9 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC11.73□□□□□ -0.53
Trim16Q99PP9 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim16Q99PP9 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trim16Q99PP9 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trim16Q99PP9 Dclk1-204ENSMUST00000196745 7962 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim16Q99PP9 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim16Q99PP9 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim16Q99PP9 Tox4-201ENSMUST00000022766 5350 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Trim16Q99PP9 Col6a6-203ENSMUST00000166431 7098 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Trim16Q99PP9 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim16Q99PP9 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trim16Q99PP9 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC11.73□□□□□ -0.53
Trim16Q99PP9 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim16Q99PP9 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Trim16Q99PP9 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC11.73□□□□□ -0.53
Trim16Q99PP9 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim16Q99PP9 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim16Q99PP9 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trim16Q99PP9 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trim16Q99PP9 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim16Q99PP9 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Trim16Q99PP9 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim16Q99PP9 Gm9630-201ENSMUST00000178304 885 ntBASIC11.73□□□□□ -0.53
Trim16Q99PP9 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim16Q99PP9 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trim16Q99PP9 Gm26956-201ENSMUST00000182176 986 ntBASIC11.73□□□□□ -0.53
Trim16Q99PP9 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC11.73□□□□□ -0.53
Trim16Q99PP9 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trim16Q99PP9 Plekha6-204ENSMUST00000187285 5040 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Trim16Q99PP9 Gm38341-201ENSMUST00000195357 515 ntBASIC11.73□□□□□ -0.53
Trim16Q99PP9 Gm43758-201ENSMUST00000199500 367 ntBASIC11.73□□□□□ -0.53
Trim16Q99PP9 Gm43822-201ENSMUST00000200285 476 ntBASIC11.73□□□□□ -0.53
Trim16Q99PP9 Gm3961-201ENSMUST00000204425 994 ntBASIC11.73□□□□□ -0.53
Trim16Q99PP9 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
Trim16Q99PP9 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim16Q99PP9 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trim16Q99PP9 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim16Q99PP9 Ciita-201ENSMUST00000023147 5254 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim16Q99PP9 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim16Q99PP9 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim16Q99PP9 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim16Q99PP9 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim16Q99PP9 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim16Q99PP9 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim16Q99PP9 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim16Q99PP9 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Trim16Q99PP9 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trim16Q99PP9 Olfr582-201ENSMUST00000098212 960 ntBASIC11.73□□□□□ -0.53
Trim16Q99PP9 Tjp1-201ENSMUST00000032729 6102 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim16Q99PP9 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim16Q99PP9 Cep250-204ENSMUST00000109619 7977 ntAPPRIS P4 TSL 5 BASIC11.73□□□□□ -0.53
Trim16Q99PP9 Cep250-201ENSMUST00000039994 7979 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Trim16Q99PP9 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim16Q99PP9 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
Trim16Q99PP9 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trim16Q99PP9 Sel1l-201ENSMUST00000021347 6300 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim16Q99PP9 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim16Q99PP9 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim16Q99PP9 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Trim16Q99PP9 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim16Q99PP9 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trim16Q99PP9 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Trim16Q99PP9 Tiam1-203ENSMUST00000114122 4596 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trim16Q99PP9 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim16Q99PP9 Tnfaip8l3-201ENSMUST00000098760 4403 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim16Q99PP9 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC11.72□□□□□ -0.53
Trim16Q99PP9 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trim16Q99PP9 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim16Q99PP9 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Trim16Q99PP9 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim16Q99PP9 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim16Q99PP9 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trim16Q99PP9 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC11.72□□□□□ -0.53
Trim16Q99PP9 Thsd4-206ENSMUST00000171654 8522 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Trim16Q99PP9 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim16Q99PP9 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim16Q99PP9 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Trim16Q99PP9 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim16Q99PP9 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trim16Q99PP9 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim16Q99PP9 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trim16Q99PP9 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC11.72□□□□□ -0.53
Trim16Q99PP9 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC11.72□□□□□ -0.53
Trim16Q99PP9 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim16Q99PP9 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC11.72□□□□□ -0.53
Trim16Q99PP9 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC11.72□□□□□ -0.53
Trim16Q99PP9 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trim16Q99PP9 Gm42937-201ENSMUST00000197360 752 ntBASIC11.72□□□□□ -0.53
Trim16Q99PP9 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim16Q99PP9 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Trim16Q99PP9 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC11.72□□□□□ -0.53
Trim16Q99PP9 Gm44124-201ENSMUST00000204159 472 ntBASIC11.72□□□□□ -0.53
Trim16Q99PP9 AC113031.8-201ENSMUST00000227856 631 ntBASIC11.72□□□□□ -0.53
Trim16Q99PP9 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim16Q99PP9 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Trim16Q99PP9 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 52.1 ms