Protein–RNA interactions for Protein: Q99PM3

Gtf2a1, Transcription initiation factor IIA subunit 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf2a1Q99PM3 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Gtf2a1Q99PM3 Gcc1-201ENSMUST00000064377 2859 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Gtf2a1Q99PM3 Exoc7-203ENSMUST00000106413 3298 ntAPPRIS ALT1 TSL 5 BASIC13.04□□□□□ -0.32
Gtf2a1Q99PM3 Spaar-201ENSMUST00000131248 4086 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Gtf2a1Q99PM3 Zfp420-202ENSMUST00000074876 2537 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Gtf2a1Q99PM3 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Gtf2a1Q99PM3 Amph-201ENSMUST00000003345 3367 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Gtf2a1Q99PM3 Gm40289-201ENSMUST00000201470 2268 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Gtf2a1Q99PM3 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Gtf2a1Q99PM3 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Gtf2a1Q99PM3 Gm44103-201ENSMUST00000204364 3662 ntBASIC13.03□□□□□ -0.32
Gtf2a1Q99PM3 Dcun1d4-201ENSMUST00000063882 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Gtf2a1Q99PM3 Habp2-202ENSMUST00000095948 2815 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Gtf2a1Q99PM3 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC13.03□□□□□ -0.32
Gtf2a1Q99PM3 Cish-201ENSMUST00000085102 2850 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Gtf2a1Q99PM3 Gpr155-204ENSMUST00000112044 4201 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Gtf2a1Q99PM3 Elmod3-201ENSMUST00000070990 2122 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Gtf2a1Q99PM3 Tram2-201ENSMUST00000037998 6492 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Gtf2a1Q99PM3 Thsd4-206ENSMUST00000171654 8522 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Gtf2a1Q99PM3 Hmg20a-205ENSMUST00000215269 1700 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Gtf2a1Q99PM3 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Gtf2a1Q99PM3 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Gtf2a1Q99PM3 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Gtf2a1Q99PM3 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC13.03□□□□□ -0.32
Gtf2a1Q99PM3 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC13.03□□□□□ -0.32
Gtf2a1Q99PM3 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Gtf2a1Q99PM3 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC13.03□□□□□ -0.32
Gtf2a1Q99PM3 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC13.03□□□□□ -0.32
Gtf2a1Q99PM3 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC13.03□□□□□ -0.32
Gtf2a1Q99PM3 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC13.03□□□□□ -0.32
Gtf2a1Q99PM3 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Gtf2a1Q99PM3 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC13.03□□□□□ -0.32
Gtf2a1Q99PM3 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Gtf2a1Q99PM3 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Gtf2a1Q99PM3 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Gtf2a1Q99PM3 Gm6170-201ENSMUST00000187672 1388 ntBASIC13.03□□□□□ -0.32
Gtf2a1Q99PM3 Col19a1-202ENSMUST00000115244 4266 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Gtf2a1Q99PM3 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Gtf2a1Q99PM3 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC13.03□□□□□ -0.32
Gtf2a1Q99PM3 Il6st-201ENSMUST00000070731 5207 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
Gtf2a1Q99PM3 Gm364-201ENSMUST00000114725 2156 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Gtf2a1Q99PM3 Ntrk2-207ENSMUST00000225488 4706 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Gtf2a1Q99PM3 Tacc2-208ENSMUST00000207549 3492 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Gtf2a1Q99PM3 Slc25a44-204ENSMUST00000195657 3504 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Gtf2a1Q99PM3 Celf5-202ENSMUST00000119060 4166 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Gtf2a1Q99PM3 Tom1l2-203ENSMUST00000093048 4864 ntTSL 5 BASIC13.02□□□□□ -0.32
Gtf2a1Q99PM3 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Gtf2a1Q99PM3 Decr1-201ENSMUST00000029877 2959 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Gtf2a1Q99PM3 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Gtf2a1Q99PM3 Zc3h18-202ENSMUST00000093073 3705 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Gtf2a1Q99PM3 Gm15943-201ENSMUST00000147638 3821 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Gtf2a1Q99PM3 Acsm5-205ENSMUST00000207440 2494 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Gtf2a1Q99PM3 Gm18806-201ENSMUST00000207607 1775 ntBASIC13.02□□□□□ -0.32
Gtf2a1Q99PM3 Gm19178-201ENSMUST00000217524 1819 ntBASIC13.02□□□□□ -0.32
Gtf2a1Q99PM3 Gm21817-201ENSMUST00000178584 2583 ntBASIC13.02□□□□□ -0.32
Gtf2a1Q99PM3 Gm26822-201ENSMUST00000181732 3374 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Gtf2a1Q99PM3 Mov10-203ENSMUST00000106775 3584 ntTSL 5 BASIC13.02□□□□□ -0.32
Gtf2a1Q99PM3 Mov10-206ENSMUST00000166979 3584 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Gtf2a1Q99PM3 Fn1-203ENSMUST00000186129 7797 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Gtf2a1Q99PM3 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Gtf2a1Q99PM3 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC13.02□□□□□ -0.33
Gtf2a1Q99PM3 Gpr68-202ENSMUST00000110065 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Gtf2a1Q99PM3 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC13.02□□□□□ -0.33
Gtf2a1Q99PM3 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
Gtf2a1Q99PM3 Gm7153-201ENSMUST00000117092 455 ntBASIC13.02□□□□□ -0.33
Gtf2a1Q99PM3 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC13.02□□□□□ -0.33
Gtf2a1Q99PM3 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC13.02□□□□□ -0.33
Gtf2a1Q99PM3 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Gtf2a1Q99PM3 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Gtf2a1Q99PM3 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC13.02□□□□□ -0.33
Gtf2a1Q99PM3 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC13.02□□□□□ -0.33
Gtf2a1Q99PM3 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC13.02□□□□□ -0.33
Gtf2a1Q99PM3 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Gtf2a1Q99PM3 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Gtf2a1Q99PM3 Bbs9-209ENSMUST00000147405 3045 ntAPPRIS ALT1 TSL 5 BASIC13.02□□□□□ -0.33
Gtf2a1Q99PM3 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Gtf2a1Q99PM3 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Gtf2a1Q99PM3 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC13.02□□□□□ -0.33
Gtf2a1Q99PM3 Ogdh-204ENSMUST00000101554 4106 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Gtf2a1Q99PM3 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Gtf2a1Q99PM3 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Gtf2a1Q99PM3 Gm29685-201ENSMUST00000219670 2365 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Gtf2a1Q99PM3 Immt-206ENSMUST00000166975 2469 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Gtf2a1Q99PM3 Elf5-206ENSMUST00000164172 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Gtf2a1Q99PM3 Axin2-202ENSMUST00000106711 2551 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Gtf2a1Q99PM3 D130017N08Rik-202ENSMUST00000180951 2573 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Gtf2a1Q99PM3 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Gtf2a1Q99PM3 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Gtf2a1Q99PM3 Thbs3-202ENSMUST00000119084 2993 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Gtf2a1Q99PM3 Scn10a-202ENSMUST00000213392 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Gtf2a1Q99PM3 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Gtf2a1Q99PM3 Mindy4-201ENSMUST00000053094 4270 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Gtf2a1Q99PM3 Sptan1-204ENSMUST00000113717 7958 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Gtf2a1Q99PM3 Tmem150c-201ENSMUST00000063192 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Gtf2a1Q99PM3 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Gtf2a1Q99PM3 Celf1-205ENSMUST00000111449 4441 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Gtf2a1Q99PM3 Mef2a-204ENSMUST00000107476 4759 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Gtf2a1Q99PM3 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Gtf2a1Q99PM3 Lig4-201ENSMUST00000095476 5028 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Gtf2a1Q99PM3 Myo7a-201ENSMUST00000084979 6849 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms