Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Gm44158-201ENSMUST00000203881 505 ntBASIC11.28□□□□□ -0.6
Nkx6-1Q99MA9 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC11.28□□□□□ -0.6
Nkx6-1Q99MA9 Bcap31-201ENSMUST00000002091 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nkx6-1Q99MA9 AC126799.1-201ENSMUST00000221976 246 ntBASIC11.28□□□□□ -0.6
Nkx6-1Q99MA9 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nkx6-1Q99MA9 Gm4744-201ENSMUST00000073642 792 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Nkx6-1Q99MA9 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nkx6-1Q99MA9 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nkx6-1Q99MA9 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nkx6-1Q99MA9 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nkx6-1Q99MA9 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nkx6-1Q99MA9 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nkx6-1Q99MA9 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nkx6-1Q99MA9 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nkx6-1Q99MA9 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC11.28□□□□□ -0.6
Nkx6-1Q99MA9 Gm10152-201ENSMUST00000193475 1344 ntBASIC11.28□□□□□ -0.6
Nkx6-1Q99MA9 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nkx6-1Q99MA9 Gm18198-201ENSMUST00000204986 1551 ntBASIC11.28□□□□□ -0.6
Nkx6-1Q99MA9 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC11.28□□□□□ -0.6
Nkx6-1Q99MA9 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nkx6-1Q99MA9 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nkx6-1Q99MA9 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nkx6-1Q99MA9 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nkx6-1Q99MA9 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nkx6-1Q99MA9 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Nkx6-1Q99MA9 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nkx6-1Q99MA9 Gm6903-201ENSMUST00000160509 1366 ntBASIC11.28□□□□□ -0.6
Nkx6-1Q99MA9 Gm18782-201ENSMUST00000209023 1399 ntBASIC11.28□□□□□ -0.6
Nkx6-1Q99MA9 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Nkx6-1Q99MA9 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Nkx6-1Q99MA9 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Nkx6-1Q99MA9 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.6
Nkx6-1Q99MA9 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC11.27□□□□□ -0.6
Nkx6-1Q99MA9 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.6
Nkx6-1Q99MA9 Gm5380-201ENSMUST00000119296 2136 ntBASIC11.27□□□□□ -0.6
Nkx6-1Q99MA9 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Nkx6-1Q99MA9 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC11.27□□□□□ -0.6
Nkx6-1Q99MA9 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Nkx6-1Q99MA9 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Nkx6-1Q99MA9 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Nkx6-1Q99MA9 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Nkx6-1Q99MA9 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC11.27□□□□□ -0.6
Nkx6-1Q99MA9 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Nkx6-1Q99MA9 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Nkx6-1Q99MA9 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Nkx6-1Q99MA9 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Nkx6-1Q99MA9 Gm16166-201ENSMUST00000118291 787 ntBASIC11.27□□□□□ -0.61
Nkx6-1Q99MA9 Gm12990-201ENSMUST00000120372 468 ntBASIC11.27□□□□□ -0.61
Nkx6-1Q99MA9 Parvaos-201ENSMUST00000154848 1285 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Nkx6-1Q99MA9 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Nkx6-1Q99MA9 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Nkx6-1Q99MA9 Rbp2-202ENSMUST00000187905 611 ntAPPRIS P1 TSL 3 BASIC11.27□□□□□ -0.61
Nkx6-1Q99MA9 Gm29410-201ENSMUST00000188383 694 ntBASIC11.27□□□□□ -0.61
Nkx6-1Q99MA9 1700088E04Rik-210ENSMUST00000190509 871 ntTSL 5 BASIC11.27□□□□□ -0.61
Nkx6-1Q99MA9 D5Ertd615e-203ENSMUST00000198493 1032 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Nkx6-1Q99MA9 Gm43001-201ENSMUST00000198925 603 ntTSL 3 BASIC11.27□□□□□ -0.61
Nkx6-1Q99MA9 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Nkx6-1Q99MA9 Gm18059-201ENSMUST00000208073 580 ntBASIC11.27□□□□□ -0.61
Nkx6-1Q99MA9 E230034D01Rik-201ENSMUST00000214440 1212 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Nkx6-1Q99MA9 AC113082.1-201ENSMUST00000217324 327 ntBASIC11.27□□□□□ -0.61
Nkx6-1Q99MA9 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Nkx6-1Q99MA9 Gm36074-201ENSMUST00000221383 591 ntTSL 5 BASIC11.27□□□□□ -0.61
Nkx6-1Q99MA9 Higd2a-201ENSMUST00000026986 648 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Nkx6-1Q99MA9 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Nkx6-1Q99MA9 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Nkx6-1Q99MA9 Ifitm2-201ENSMUST00000081649 655 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Nkx6-1Q99MA9 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Nkx6-1Q99MA9 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Nkx6-1Q99MA9 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Nkx6-1Q99MA9 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Nkx6-1Q99MA9 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Nkx6-1Q99MA9 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Nkx6-1Q99MA9 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Nkx6-1Q99MA9 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Nkx6-1Q99MA9 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Nkx6-1Q99MA9 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Nkx6-1Q99MA9 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Nkx6-1Q99MA9 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Nkx6-1Q99MA9 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Nkx6-1Q99MA9 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Nkx6-1Q99MA9 Tmem39a-204ENSMUST00000163884 1645 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Nkx6-1Q99MA9 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Nkx6-1Q99MA9 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Nkx6-1Q99MA9 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Nkx6-1Q99MA9 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Nkx6-1Q99MA9 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC11.27□□□□□ -0.61
Nkx6-1Q99MA9 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Nkx6-1Q99MA9 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Nkx6-1Q99MA9 AC164702.1-201ENSMUST00000220135 2212 ntBASIC11.27□□□□□ -0.61
Nkx6-1Q99MA9 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Nkx6-1Q99MA9 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC11.27□□□□□ -0.61
Nkx6-1Q99MA9 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Nkx6-1Q99MA9 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Nkx6-1Q99MA9 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Nkx6-1Q99MA9 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Nkx6-1Q99MA9 Zfp809-201ENSMUST00000072465 1425 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nkx6-1Q99MA9 Gm27196-201ENSMUST00000184787 2582 ntBASIC11.26□□□□□ -0.61
Nkx6-1Q99MA9 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
Nkx6-1Q99MA9 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Nkx6-1Q99MA9 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms