Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chmp1b1Q99LU0 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC11.34□□□□□ -0.59
Chmp1b1Q99LU0 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Chmp1b1Q99LU0 Olfr624-201ENSMUST00000062144 5731 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Chmp1b1Q99LU0 B3galt5-201ENSMUST00000099497 5147 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chmp1b1Q99LU0 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chmp1b1Q99LU0 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chmp1b1Q99LU0 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chmp1b1Q99LU0 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Chmp1b1Q99LU0 Gm13142-201ENSMUST00000117213 1453 ntBASIC11.34□□□□□ -0.59
Chmp1b1Q99LU0 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chmp1b1Q99LU0 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chmp1b1Q99LU0 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Chmp1b1Q99LU0 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Chmp1b1Q99LU0 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chmp1b1Q99LU0 Gm11531-201ENSMUST00000117614 555 ntBASIC11.34□□□□□ -0.59
Chmp1b1Q99LU0 Gm14381-201ENSMUST00000122105 414 ntBASIC11.34□□□□□ -0.59
Chmp1b1Q99LU0 Gm23119-201ENSMUST00000158610 140 ntBASIC11.34□□□□□ -0.59
Chmp1b1Q99LU0 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Chmp1b1Q99LU0 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC11.34□□□□□ -0.59
Chmp1b1Q99LU0 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chmp1b1Q99LU0 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Chmp1b1Q99LU0 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Chmp1b1Q99LU0 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC11.34□□□□□ -0.59
Chmp1b1Q99LU0 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC11.34□□□□□ -0.59
Chmp1b1Q99LU0 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC11.34□□□□□ -0.59
Chmp1b1Q99LU0 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chmp1b1Q99LU0 Gm6334-201ENSMUST00000207083 228 ntBASIC11.34□□□□□ -0.59
Chmp1b1Q99LU0 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chmp1b1Q99LU0 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chmp1b1Q99LU0 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chmp1b1Q99LU0 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chmp1b1Q99LU0 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chmp1b1Q99LU0 Scn10a-204ENSMUST00000214408 5877 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chmp1b1Q99LU0 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chmp1b1Q99LU0 Ptpn4-201ENSMUST00000064091 10874 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Chmp1b1Q99LU0 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
Chmp1b1Q99LU0 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chmp1b1Q99LU0 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Chmp1b1Q99LU0 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chmp1b1Q99LU0 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Chmp1b1Q99LU0 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC11.34□□□□□ -0.59
Chmp1b1Q99LU0 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chmp1b1Q99LU0 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chmp1b1Q99LU0 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chmp1b1Q99LU0 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chmp1b1Q99LU0 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chmp1b1Q99LU0 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chmp1b1Q99LU0 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Chmp1b1Q99LU0 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.59
Chmp1b1Q99LU0 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC11.33□□□□□ -0.59
Chmp1b1Q99LU0 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Chmp1b1Q99LU0 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Chmp1b1Q99LU0 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Chmp1b1Q99LU0 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Chmp1b1Q99LU0 Sez6l-201ENSMUST00000075387 6055 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Chmp1b1Q99LU0 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Chmp1b1Q99LU0 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Chmp1b1Q99LU0 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC11.33□□□□□ -0.6
Chmp1b1Q99LU0 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
Chmp1b1Q99LU0 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Chmp1b1Q99LU0 Cabin1-201ENSMUST00000001712 7417 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Chmp1b1Q99LU0 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Chmp1b1Q99LU0 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Chmp1b1Q99LU0 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Chmp1b1Q99LU0 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Chmp1b1Q99LU0 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Chmp1b1Q99LU0 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC11.33□□□□□ -0.6
Chmp1b1Q99LU0 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC11.33□□□□□ -0.6
Chmp1b1Q99LU0 Gm30285-201ENSMUST00000214614 422 ntBASIC11.33□□□□□ -0.6
Chmp1b1Q99LU0 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Chmp1b1Q99LU0 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Chmp1b1Q99LU0 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Chmp1b1Q99LU0 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Chmp1b1Q99LU0 AC167669.2-201ENSMUST00000224417 1620 ntBASIC11.33□□□□□ -0.6
Chmp1b1Q99LU0 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Chmp1b1Q99LU0 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Chmp1b1Q99LU0 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Chmp1b1Q99LU0 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Chmp1b1Q99LU0 Gm8038-201ENSMUST00000164674 2044 ntBASIC11.33□□□□□ -0.6
Chmp1b1Q99LU0 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Chmp1b1Q99LU0 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Chmp1b1Q99LU0 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Chmp1b1Q99LU0 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Chmp1b1Q99LU0 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC11.33□□□□□ -0.6
Chmp1b1Q99LU0 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Chmp1b1Q99LU0 Ank1-204ENSMUST00000117270 5652 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Chmp1b1Q99LU0 Zeb1-201ENSMUST00000025081 5805 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Chmp1b1Q99LU0 Unc79-202ENSMUST00000101099 8874 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Chmp1b1Q99LU0 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Chmp1b1Q99LU0 Med13l-201ENSMUST00000100816 9296 ntAPPRIS P3 TSL 2 BASIC11.32□□□□□ -0.6
Chmp1b1Q99LU0 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Chmp1b1Q99LU0 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Chmp1b1Q99LU0 Gm4864-201ENSMUST00000219894 1461 ntBASIC11.32□□□□□ -0.6
Chmp1b1Q99LU0 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC11.32□□□□□ -0.6
Chmp1b1Q99LU0 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Chmp1b1Q99LU0 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Chmp1b1Q99LU0 Astn1-205ENSMUST00000193042 7248 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Chmp1b1Q99LU0 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC11.32□□□□□ -0.6
Chmp1b1Q99LU0 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms