Protein–RNA interactions for Protein: Q8R1N4

Nudcd3, NudC domain-containing protein 3, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3Q8R1N4 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nudcd3Q8R1N4 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Nudcd3Q8R1N4 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nudcd3Q8R1N4 Gm36987-201ENSMUST00000194704 2979 ntBASIC11.94□□□□□ -0.5
Nudcd3Q8R1N4 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nudcd3Q8R1N4 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC11.94□□□□□ -0.5
Nudcd3Q8R1N4 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Nudcd3Q8R1N4 Gm18782-201ENSMUST00000209023 1399 ntBASIC11.94□□□□□ -0.5
Nudcd3Q8R1N4 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC11.94□□□□□ -0.5
Nudcd3Q8R1N4 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nudcd3Q8R1N4 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC11.94□□□□□ -0.5
Nudcd3Q8R1N4 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nudcd3Q8R1N4 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Nudcd3Q8R1N4 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nudcd3Q8R1N4 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nudcd3Q8R1N4 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Nudcd3Q8R1N4 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC11.94□□□□□ -0.5
Nudcd3Q8R1N4 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nudcd3Q8R1N4 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nudcd3Q8R1N4 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Nudcd3Q8R1N4 Fer1l4-201ENSMUST00000109611 6106 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Nudcd3Q8R1N4 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Nudcd3Q8R1N4 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC11.94□□□□□ -0.5
Nudcd3Q8R1N4 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Nudcd3Q8R1N4 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC11.94□□□□□ -0.5
Nudcd3Q8R1N4 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Nudcd3Q8R1N4 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Nudcd3Q8R1N4 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC11.94□□□□□ -0.5
Nudcd3Q8R1N4 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nudcd3Q8R1N4 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nudcd3Q8R1N4 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Nudcd3Q8R1N4 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Nudcd3Q8R1N4 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Nudcd3Q8R1N4 Gm6091-201ENSMUST00000098307 165 ntBASIC11.94□□□□□ -0.5
Nudcd3Q8R1N4 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Nudcd3Q8R1N4 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Nudcd3Q8R1N4 Gm45496-201ENSMUST00000209918 2917 ntBASIC11.94□□□□□ -0.5
Nudcd3Q8R1N4 Myh1-201ENSMUST00000018637 5938 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Nudcd3Q8R1N4 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nudcd3Q8R1N4 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC11.94□□□□□ -0.5
Nudcd3Q8R1N4 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nudcd3Q8R1N4 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Nudcd3Q8R1N4 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nudcd3Q8R1N4 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC11.94□□□□□ -0.5
Nudcd3Q8R1N4 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nudcd3Q8R1N4 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Nudcd3Q8R1N4 Spata13-210ENSMUST00000162945 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nudcd3Q8R1N4 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nudcd3Q8R1N4 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nudcd3Q8R1N4 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nudcd3Q8R1N4 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nudcd3Q8R1N4 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC11.93□□□□□ -0.5
Nudcd3Q8R1N4 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nudcd3Q8R1N4 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Nudcd3Q8R1N4 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nudcd3Q8R1N4 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nudcd3Q8R1N4 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nudcd3Q8R1N4 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC11.93□□□□□ -0.5
Nudcd3Q8R1N4 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Nudcd3Q8R1N4 Gm24934-201ENSMUST00000103764 111 ntBASIC11.93□□□□□ -0.5
Nudcd3Q8R1N4 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Nudcd3Q8R1N4 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nudcd3Q8R1N4 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC11.93□□□□□ -0.5
Nudcd3Q8R1N4 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nudcd3Q8R1N4 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
Nudcd3Q8R1N4 Gm42937-201ENSMUST00000197360 752 ntBASIC11.93□□□□□ -0.5
Nudcd3Q8R1N4 Gm7561-201ENSMUST00000211203 886 ntBASIC11.93□□□□□ -0.5
Nudcd3Q8R1N4 AC158982.1-201ENSMUST00000228377 901 ntBASIC11.93□□□□□ -0.5
Nudcd3Q8R1N4 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC11.93□□□□□ -0.5
Nudcd3Q8R1N4 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nudcd3Q8R1N4 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Nudcd3Q8R1N4 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
Nudcd3Q8R1N4 Sec14l1-202ENSMUST00000090433 4654 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nudcd3Q8R1N4 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nudcd3Q8R1N4 Gm13142-201ENSMUST00000117213 1453 ntBASIC11.93□□□□□ -0.5
Nudcd3Q8R1N4 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Nudcd3Q8R1N4 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Nudcd3Q8R1N4 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nudcd3Q8R1N4 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nudcd3Q8R1N4 Cep350-204ENSMUST00000138762 13307 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Nudcd3Q8R1N4 Nos1-206ENSMUST00000142742 10123 ntAPPRIS P2 TSL 5 BASIC11.93□□□□□ -0.5
Nudcd3Q8R1N4 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nudcd3Q8R1N4 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Nudcd3Q8R1N4 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Nudcd3Q8R1N4 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC11.92□□□□□ -0.5
Nudcd3Q8R1N4 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nudcd3Q8R1N4 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nudcd3Q8R1N4 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nudcd3Q8R1N4 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nudcd3Q8R1N4 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC11.92□□□□□ -0.5
Nudcd3Q8R1N4 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nudcd3Q8R1N4 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nudcd3Q8R1N4 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Nudcd3Q8R1N4 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nudcd3Q8R1N4 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nudcd3Q8R1N4 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nudcd3Q8R1N4 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Nudcd3Q8R1N4 Cbl-211ENSMUST00000206720 11372 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nudcd3Q8R1N4 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nudcd3Q8R1N4 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms