Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC12.88□□□□□ -0.35
Vcpip1Q8CDG3 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC12.88□□□□□ -0.35
Vcpip1Q8CDG3 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vcpip1Q8CDG3 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Vcpip1Q8CDG3 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vcpip1Q8CDG3 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Vcpip1Q8CDG3 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vcpip1Q8CDG3 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vcpip1Q8CDG3 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vcpip1Q8CDG3 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vcpip1Q8CDG3 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Vcpip1Q8CDG3 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC12.88□□□□□ -0.35
Vcpip1Q8CDG3 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vcpip1Q8CDG3 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vcpip1Q8CDG3 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC12.87□□□□□ -0.35
Vcpip1Q8CDG3 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vcpip1Q8CDG3 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Vcpip1Q8CDG3 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Vcpip1Q8CDG3 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vcpip1Q8CDG3 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vcpip1Q8CDG3 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Vcpip1Q8CDG3 AC154671.1-201ENSMUST00000228617 1578 ntBASIC12.87□□□□□ -0.35
Vcpip1Q8CDG3 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC12.87□□□□□ -0.35
Vcpip1Q8CDG3 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Vcpip1Q8CDG3 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vcpip1Q8CDG3 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Vcpip1Q8CDG3 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC12.87□□□□□ -0.35
Vcpip1Q8CDG3 Gm11531-201ENSMUST00000117614 555 ntBASIC12.87□□□□□ -0.35
Vcpip1Q8CDG3 Gm12749-201ENSMUST00000122138 1159 ntBASIC12.87□□□□□ -0.35
Vcpip1Q8CDG3 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Vcpip1Q8CDG3 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC12.87□□□□□ -0.35
Vcpip1Q8CDG3 Gm2383-201ENSMUST00000181461 807 ntBASIC12.87□□□□□ -0.35
Vcpip1Q8CDG3 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC12.87□□□□□ -0.35
Vcpip1Q8CDG3 Gm44711-201ENSMUST00000205414 1264 ntBASIC12.87□□□□□ -0.35
Vcpip1Q8CDG3 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vcpip1Q8CDG3 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vcpip1Q8CDG3 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vcpip1Q8CDG3 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC12.87□□□□□ -0.35
Vcpip1Q8CDG3 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vcpip1Q8CDG3 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC12.87□□□□□ -0.35
Vcpip1Q8CDG3 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Vcpip1Q8CDG3 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Vcpip1Q8CDG3 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vcpip1Q8CDG3 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vcpip1Q8CDG3 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vcpip1Q8CDG3 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Vcpip1Q8CDG3 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC12.87□□□□□ -0.35
Vcpip1Q8CDG3 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC12.86□□□□□ -0.35
Vcpip1Q8CDG3 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vcpip1Q8CDG3 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vcpip1Q8CDG3 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Vcpip1Q8CDG3 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC12.86□□□□□ -0.35
Vcpip1Q8CDG3 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Vcpip1Q8CDG3 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vcpip1Q8CDG3 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vcpip1Q8CDG3 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vcpip1Q8CDG3 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vcpip1Q8CDG3 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vcpip1Q8CDG3 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC12.86□□□□□ -0.35
Vcpip1Q8CDG3 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC12.86□□□□□ -0.35
Vcpip1Q8CDG3 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC12.86□□□□□ -0.35
Vcpip1Q8CDG3 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC12.86□□□□□ -0.35
Vcpip1Q8CDG3 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC12.86□□□□□ -0.35
Vcpip1Q8CDG3 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Vcpip1Q8CDG3 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC12.86□□□□□ -0.35
Vcpip1Q8CDG3 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
Vcpip1Q8CDG3 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC12.86□□□□□ -0.35
Vcpip1Q8CDG3 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC12.86□□□□□ -0.35
Vcpip1Q8CDG3 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC12.86□□□□□ -0.35
Vcpip1Q8CDG3 Gm5363-201ENSMUST00000211927 938 ntBASIC12.86□□□□□ -0.35
Vcpip1Q8CDG3 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Vcpip1Q8CDG3 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vcpip1Q8CDG3 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vcpip1Q8CDG3 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vcpip1Q8CDG3 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Vcpip1Q8CDG3 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC12.86□□□□□ -0.35
Vcpip1Q8CDG3 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vcpip1Q8CDG3 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vcpip1Q8CDG3 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC12.86□□□□□ -0.35
Vcpip1Q8CDG3 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vcpip1Q8CDG3 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC12.86□□□□□ -0.35
Vcpip1Q8CDG3 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vcpip1Q8CDG3 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vcpip1Q8CDG3 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vcpip1Q8CDG3 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vcpip1Q8CDG3 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vcpip1Q8CDG3 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Vcpip1Q8CDG3 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vcpip1Q8CDG3 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vcpip1Q8CDG3 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC12.86□□□□□ -0.35
Vcpip1Q8CDG3 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vcpip1Q8CDG3 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Vcpip1Q8CDG3 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Vcpip1Q8CDG3 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Vcpip1Q8CDG3 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Vcpip1Q8CDG3 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Vcpip1Q8CDG3 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Vcpip1Q8CDG3 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Vcpip1Q8CDG3 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Vcpip1Q8CDG3 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms