Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Smco3Q8BQM7 Sp6-201ENSMUST00000047997 3546 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Smco3Q8BQM7 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Smco3Q8BQM7 Gm10339-203ENSMUST00000225409 1671 ntBASIC9.83□□□□□ -0.84
Smco3Q8BQM7 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Smco3Q8BQM7 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC9.83□□□□□ -0.84
Smco3Q8BQM7 Ccdc62-201ENSMUST00000094320 3924 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
Smco3Q8BQM7 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Smco3Q8BQM7 Megf11-202ENSMUST00000093829 3652 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Smco3Q8BQM7 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
Smco3Q8BQM7 Ric8a-201ENSMUST00000026558 3406 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Smco3Q8BQM7 Slc9a8-202ENSMUST00000073873 4429 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
Smco3Q8BQM7 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC9.83□□□□□ -0.84
Smco3Q8BQM7 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
Smco3Q8BQM7 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Smco3Q8BQM7 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC9.83□□□□□ -0.84
Smco3Q8BQM7 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC9.83□□□□□ -0.84
Smco3Q8BQM7 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC9.83□□□□□ -0.84
Smco3Q8BQM7 Gm16296-201ENSMUST00000159905 325 ntBASIC9.83□□□□□ -0.84
Smco3Q8BQM7 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC9.83□□□□□ -0.84
Smco3Q8BQM7 Gm37917-201ENSMUST00000194711 392 ntBASIC9.83□□□□□ -0.84
Smco3Q8BQM7 Gm37922-201ENSMUST00000195596 455 ntBASIC9.83□□□□□ -0.84
Smco3Q8BQM7 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC9.83□□□□□ -0.84
Smco3Q8BQM7 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC9.83□□□□□ -0.84
Smco3Q8BQM7 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC9.83□□□□□ -0.84
Smco3Q8BQM7 AC125117.1-201ENSMUST00000228121 468 ntBASIC9.83□□□□□ -0.84
Smco3Q8BQM7 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
Smco3Q8BQM7 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Smco3Q8BQM7 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
Smco3Q8BQM7 Gm43823-201ENSMUST00000197391 1808 ntBASIC9.83□□□□□ -0.84
Smco3Q8BQM7 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Smco3Q8BQM7 Col6a5-203ENSMUST00000190193 9289 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
Smco3Q8BQM7 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC9.83□□□□□ -0.84
Smco3Q8BQM7 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Smco3Q8BQM7 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Smco3Q8BQM7 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Smco3Q8BQM7 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Smco3Q8BQM7 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
Smco3Q8BQM7 Zzef1-207ENSMUST00000172220 11249 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
Smco3Q8BQM7 Tcf7l2-207ENSMUST00000111653 2629 ntAPPRIS ALT2 TSL 2 BASIC9.83□□□□□ -0.84
Smco3Q8BQM7 Slc10a7-201ENSMUST00000034111 3595 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Smco3Q8BQM7 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Smco3Q8BQM7 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Smco3Q8BQM7 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC9.82□□□□□ -0.84
Smco3Q8BQM7 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Smco3Q8BQM7 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Smco3Q8BQM7 Nmt2-201ENSMUST00000081932 4461 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Smco3Q8BQM7 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC9.82□□□□□ -0.84
Smco3Q8BQM7 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Smco3Q8BQM7 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC9.82□□□□□ -0.84
Smco3Q8BQM7 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC9.82□□□□□ -0.84
Smco3Q8BQM7 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC9.82□□□□□ -0.84
Smco3Q8BQM7 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
Smco3Q8BQM7 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC9.82□□□□□ -0.84
Smco3Q8BQM7 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Smco3Q8BQM7 Ppp6r3-201ENSMUST00000025846 4841 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
Smco3Q8BQM7 Limd1-201ENSMUST00000026269 4848 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Smco3Q8BQM7 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC9.82□□□□□ -0.84
Smco3Q8BQM7 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Smco3Q8BQM7 Vipas39-203ENSMUST00000179379 2418 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Smco3Q8BQM7 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Smco3Q8BQM7 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Smco3Q8BQM7 Plxna3-201ENSMUST00000004326 6943 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Smco3Q8BQM7 Usp45-201ENSMUST00000040429 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Smco3Q8BQM7 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC9.82□□□□□ -0.84
Smco3Q8BQM7 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Smco3Q8BQM7 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Smco3Q8BQM7 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Smco3Q8BQM7 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Smco3Q8BQM7 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Smco3Q8BQM7 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Smco3Q8BQM7 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC9.82□□□□□ -0.84
Smco3Q8BQM7 Gm9022-201ENSMUST00000182482 992 ntBASIC9.82□□□□□ -0.84
Smco3Q8BQM7 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC9.82□□□□□ -0.84
Smco3Q8BQM7 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC9.82□□□□□ -0.84
Smco3Q8BQM7 Gm6007-201ENSMUST00000208170 823 ntBASIC9.82□□□□□ -0.84
Smco3Q8BQM7 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC9.82□□□□□ -0.84
Smco3Q8BQM7 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Smco3Q8BQM7 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Smco3Q8BQM7 Il17ra-201ENSMUST00000002976 7752 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Smco3Q8BQM7 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Smco3Q8BQM7 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC9.82□□□□□ -0.84
Smco3Q8BQM7 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Smco3Q8BQM7 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
Smco3Q8BQM7 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Smco3Q8BQM7 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Smco3Q8BQM7 Cyp2s1-202ENSMUST00000108395 3161 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Smco3Q8BQM7 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Smco3Q8BQM7 Arfgef3-201ENSMUST00000019999 5606 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Smco3Q8BQM7 Tgfbrap1-201ENSMUST00000095014 5607 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Smco3Q8BQM7 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Smco3Q8BQM7 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Smco3Q8BQM7 Lvrn-201ENSMUST00000025358 3219 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
Smco3Q8BQM7 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Smco3Q8BQM7 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
Smco3Q8BQM7 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC9.82□□□□□ -0.84
Smco3Q8BQM7 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
Smco3Q8BQM7 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Smco3Q8BQM7 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC9.82□□□□□ -0.84
Smco3Q8BQM7 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 61.4 ms