Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc40Q8BI79 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc40Q8BI79 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc40Q8BI79 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc40Q8BI79 Gripap1-203ENSMUST00000115675 3015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc40Q8BI79 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC12.56□□□□□ -0.4
Ccdc40Q8BI79 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc40Q8BI79 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc40Q8BI79 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc40Q8BI79 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Ccdc40Q8BI79 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc40Q8BI79 Mmel1-202ENSMUST00000080559 2926 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Ccdc40Q8BI79 Nfic-201ENSMUST00000020461 3348 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc40Q8BI79 Gimap8-202ENSMUST00000203083 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc40Q8BI79 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc40Q8BI79 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc40Q8BI79 Pde1c-201ENSMUST00000044505 3907 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc40Q8BI79 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Ccdc40Q8BI79 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc40Q8BI79 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc40Q8BI79 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc40Q8BI79 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc40Q8BI79 Gm24934-201ENSMUST00000103764 111 ntBASIC12.56□□□□□ -0.4
Ccdc40Q8BI79 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc40Q8BI79 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc40Q8BI79 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc40Q8BI79 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC12.56□□□□□ -0.4
Ccdc40Q8BI79 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC12.56□□□□□ -0.4
Ccdc40Q8BI79 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC12.56□□□□□ -0.4
Ccdc40Q8BI79 Gm18054-201ENSMUST00000207539 555 ntBASIC12.56□□□□□ -0.4
Ccdc40Q8BI79 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc40Q8BI79 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Ccdc40Q8BI79 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Ccdc40Q8BI79 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc40Q8BI79 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
Ccdc40Q8BI79 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Ccdc40Q8BI79 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc40Q8BI79 Mid1-214ENSMUST00000163810 3689 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Ccdc40Q8BI79 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc40Q8BI79 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc40Q8BI79 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc40Q8BI79 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc40Q8BI79 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Ccdc40Q8BI79 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc40Q8BI79 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc40Q8BI79 BC004004-201ENSMUST00000064709 2803 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc40Q8BI79 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc40Q8BI79 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Ccdc40Q8BI79 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc40Q8BI79 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Ccdc40Q8BI79 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc40Q8BI79 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc40Q8BI79 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc40Q8BI79 Parvg-207ENSMUST00000163667 2700 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Ccdc40Q8BI79 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC12.55□□□□□ -0.4
Ccdc40Q8BI79 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC12.55□□□□□ -0.4
Ccdc40Q8BI79 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc40Q8BI79 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc40Q8BI79 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc40Q8BI79 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC12.55□□□□□ -0.4
Ccdc40Q8BI79 Nedd9-202ENSMUST00000163623 4626 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc40Q8BI79 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc40Q8BI79 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc40Q8BI79 Trmt44-201ENSMUST00000030980 3790 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc40Q8BI79 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc40Q8BI79 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc40Q8BI79 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Ccdc40Q8BI79 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc40Q8BI79 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
Ccdc40Q8BI79 Gm14127-201ENSMUST00000117906 678 ntBASIC12.55□□□□□ -0.4
Ccdc40Q8BI79 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC12.55□□□□□ -0.4
Ccdc40Q8BI79 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC12.55□□□□□ -0.4
Ccdc40Q8BI79 Gm25043-201ENSMUST00000158604 212 ntBASIC12.55□□□□□ -0.4
Ccdc40Q8BI79 Gm8801-201ENSMUST00000173255 1064 ntBASIC12.55□□□□□ -0.4
Ccdc40Q8BI79 Gm29396-201ENSMUST00000185659 716 ntBASIC12.55□□□□□ -0.4
Ccdc40Q8BI79 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC12.55□□□□□ -0.4
Ccdc40Q8BI79 Gm42693-201ENSMUST00000196779 631 ntBASIC12.55□□□□□ -0.4
Ccdc40Q8BI79 Gm19963-201ENSMUST00000208413 1255 ntBASIC12.55□□□□□ -0.4
Ccdc40Q8BI79 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC12.55□□□□□ -0.4
Ccdc40Q8BI79 Morn2-202ENSMUST00000227729 656 ntBASIC12.55□□□□□ -0.4
Ccdc40Q8BI79 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc40Q8BI79 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc40Q8BI79 Gm12333-201ENSMUST00000155508 2669 ntTSL 3 BASIC12.55□□□□□ -0.4
Ccdc40Q8BI79 E030026E10Rik-201ENSMUST00000200395 2217 ntBASIC12.55□□□□□ -0.4
Ccdc40Q8BI79 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc40Q8BI79 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc40Q8BI79 Srrt-201ENSMUST00000040873 3024 ntAPPRIS P3 TSL 5 BASIC12.55□□□□□ -0.4
Ccdc40Q8BI79 Gm7224-201ENSMUST00000121359 2066 ntBASIC12.55□□□□□ -0.4
Ccdc40Q8BI79 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc40Q8BI79 Gm3756-201ENSMUST00000169182 1355 ntBASIC12.55□□□□□ -0.4
Ccdc40Q8BI79 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC12.55□□□□□ -0.4
Ccdc40Q8BI79 AC122197.2-201ENSMUST00000219196 1635 ntBASIC12.55□□□□□ -0.4
Ccdc40Q8BI79 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc40Q8BI79 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC12.55□□□□□ -0.4
Ccdc40Q8BI79 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc40Q8BI79 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc40Q8BI79 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc40Q8BI79 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC12.54□□□□□ -0.4
Ccdc40Q8BI79 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Ccdc40Q8BI79 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms