Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC11.59□□□□□ -0.55
Rnf38Q8BI21 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC11.59□□□□□ -0.55
Rnf38Q8BI21 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
Rnf38Q8BI21 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Rnf38Q8BI21 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rnf38Q8BI21 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rnf38Q8BI21 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC11.59□□□□□ -0.55
Rnf38Q8BI21 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rnf38Q8BI21 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rnf38Q8BI21 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Rnf38Q8BI21 Pck1-201ENSMUST00000029017 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rnf38Q8BI21 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rnf38Q8BI21 Gm38055-201ENSMUST00000195353 2217 ntBASIC11.59□□□□□ -0.55
Rnf38Q8BI21 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rnf38Q8BI21 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC11.59□□□□□ -0.55
Rnf38Q8BI21 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rnf38Q8BI21 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rnf38Q8BI21 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rnf38Q8BI21 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rnf38Q8BI21 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC11.58□□□□□ -0.55
Rnf38Q8BI21 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Rnf38Q8BI21 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC11.58□□□□□ -0.56
Rnf38Q8BI21 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Rnf38Q8BI21 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Rnf38Q8BI21 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC11.58□□□□□ -0.56
Rnf38Q8BI21 Gm24934-201ENSMUST00000103764 111 ntBASIC11.58□□□□□ -0.56
Rnf38Q8BI21 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC11.58□□□□□ -0.56
Rnf38Q8BI21 Gm12036-201ENSMUST00000120008 530 ntBASIC11.58□□□□□ -0.56
Rnf38Q8BI21 Gm12329-201ENSMUST00000120829 1007 ntBASIC11.58□□□□□ -0.56
Rnf38Q8BI21 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Rnf38Q8BI21 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Rnf38Q8BI21 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Rnf38Q8BI21 Gm5850-201ENSMUST00000192923 1206 ntBASIC11.58□□□□□ -0.56
Rnf38Q8BI21 Gm38158-201ENSMUST00000194617 339 ntBASIC11.58□□□□□ -0.56
Rnf38Q8BI21 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC11.58□□□□□ -0.56
Rnf38Q8BI21 Gm19309-201ENSMUST00000218295 205 ntBASIC11.58□□□□□ -0.56
Rnf38Q8BI21 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC11.58□□□□□ -0.56
Rnf38Q8BI21 AC154462.2-201ENSMUST00000227519 370 ntBASIC11.58□□□□□ -0.56
Rnf38Q8BI21 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Rnf38Q8BI21 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Rnf38Q8BI21 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Rnf38Q8BI21 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC11.58□□□□□ -0.56
Rnf38Q8BI21 AC164099.2-201ENSMUST00000227795 2005 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Rnf38Q8BI21 Gm9796-201ENSMUST00000062249 2250 ntBASIC11.58□□□□□ -0.56
Rnf38Q8BI21 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Rnf38Q8BI21 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC11.58□□□□□ -0.56
Rnf38Q8BI21 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Rnf38Q8BI21 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Rnf38Q8BI21 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Rnf38Q8BI21 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Rnf38Q8BI21 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Rnf38Q8BI21 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Rnf38Q8BI21 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Rnf38Q8BI21 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Rnf38Q8BI21 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rnf38Q8BI21 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC11.57□□□□□ -0.56
Rnf38Q8BI21 Gm5380-201ENSMUST00000119296 2136 ntBASIC11.57□□□□□ -0.56
Rnf38Q8BI21 Gm8155-201ENSMUST00000216363 1612 ntBASIC11.57□□□□□ -0.56
Rnf38Q8BI21 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rnf38Q8BI21 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rnf38Q8BI21 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rnf38Q8BI21 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC11.57□□□□□ -0.56
Rnf38Q8BI21 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Rnf38Q8BI21 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rnf38Q8BI21 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rnf38Q8BI21 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rnf38Q8BI21 Gm14247-201ENSMUST00000120950 237 ntBASIC11.57□□□□□ -0.56
Rnf38Q8BI21 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Rnf38Q8BI21 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC11.57□□□□□ -0.56
Rnf38Q8BI21 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Rnf38Q8BI21 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Rnf38Q8BI21 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC11.57□□□□□ -0.56
Rnf38Q8BI21 Gm37201-201ENSMUST00000191845 523 ntBASIC11.57□□□□□ -0.56
Rnf38Q8BI21 Gm42693-201ENSMUST00000196779 631 ntBASIC11.57□□□□□ -0.56
Rnf38Q8BI21 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC11.57□□□□□ -0.56
Rnf38Q8BI21 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
Rnf38Q8BI21 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rnf38Q8BI21 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rnf38Q8BI21 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rnf38Q8BI21 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Rnf38Q8BI21 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rnf38Q8BI21 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Rnf38Q8BI21 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rnf38Q8BI21 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rnf38Q8BI21 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rnf38Q8BI21 AC122811.1-201ENSMUST00000222257 2921 ntBASIC11.57□□□□□ -0.56
Rnf38Q8BI21 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rnf38Q8BI21 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Rnf38Q8BI21 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Rnf38Q8BI21 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rnf38Q8BI21 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rnf38Q8BI21 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC11.57□□□□□ -0.56
Rnf38Q8BI21 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rnf38Q8BI21 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rnf38Q8BI21 Gimap8-202ENSMUST00000203083 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rnf38Q8BI21 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Rnf38Q8BI21 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rnf38Q8BI21 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC11.57□□□□□ -0.56
Rnf38Q8BI21 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rnf38Q8BI21 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 63.7 ms