Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC13.23□□□□□ -0.29
Usp6nlQ80XC3 Gm37028-201ENSMUST00000194276 107 ntBASIC13.23□□□□□ -0.29
Usp6nlQ80XC3 Gm44506-201ENSMUST00000206278 965 ntBASIC13.23□□□□□ -0.29
Usp6nlQ80XC3 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC13.23□□□□□ -0.29
Usp6nlQ80XC3 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC13.23□□□□□ -0.29
Usp6nlQ80XC3 AC122350.1-201ENSMUST00000228135 533 ntBASIC13.23□□□□□ -0.29
Usp6nlQ80XC3 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Usp6nlQ80XC3 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Usp6nlQ80XC3 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Usp6nlQ80XC3 Gm5879-201ENSMUST00000089501 1209 ntBASIC13.23□□□□□ -0.29
Usp6nlQ80XC3 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Usp6nlQ80XC3 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Usp6nlQ80XC3 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Usp6nlQ80XC3 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Usp6nlQ80XC3 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Usp6nlQ80XC3 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Usp6nlQ80XC3 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Usp6nlQ80XC3 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
Usp6nlQ80XC3 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
Usp6nlQ80XC3 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Usp6nlQ80XC3 Gm43447-201ENSMUST00000198471 1535 ntBASIC13.23□□□□□ -0.29
Usp6nlQ80XC3 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Usp6nlQ80XC3 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Usp6nlQ80XC3 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Usp6nlQ80XC3 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Usp6nlQ80XC3 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Usp6nlQ80XC3 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Usp6nlQ80XC3 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC13.22□□□□□ -0.29
Usp6nlQ80XC3 Nudt18-202ENSMUST00000228554 3619 ntBASIC13.22□□□□□ -0.29
Usp6nlQ80XC3 Gm28323-201ENSMUST00000186817 2499 ntBASIC13.22□□□□□ -0.29
Usp6nlQ80XC3 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Usp6nlQ80XC3 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Usp6nlQ80XC3 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Usp6nlQ80XC3 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC13.22□□□□□ -0.29
Usp6nlQ80XC3 Gm37660-201ENSMUST00000192754 1732 ntBASIC13.22□□□□□ -0.29
Usp6nlQ80XC3 AC123834.1-201ENSMUST00000225346 2043 ntBASIC13.22□□□□□ -0.29
Usp6nlQ80XC3 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Usp6nlQ80XC3 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Usp6nlQ80XC3 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Usp6nlQ80XC3 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC13.22□□□□□ -0.29
Usp6nlQ80XC3 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Usp6nlQ80XC3 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Usp6nlQ80XC3 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Usp6nlQ80XC3 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Usp6nlQ80XC3 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Usp6nlQ80XC3 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC13.22□□□□□ -0.29
Usp6nlQ80XC3 Gm15523-201ENSMUST00000160463 439 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Usp6nlQ80XC3 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Usp6nlQ80XC3 Gm20714-202ENSMUST00000176436 748 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Usp6nlQ80XC3 Gm3551-201ENSMUST00000190750 664 ntBASIC13.22□□□□□ -0.29
Usp6nlQ80XC3 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Usp6nlQ80XC3 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC13.22□□□□□ -0.29
Usp6nlQ80XC3 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC13.22□□□□□ -0.29
Usp6nlQ80XC3 CT485606.1-201ENSMUST00000213187 878 ntBASIC13.22□□□□□ -0.29
Usp6nlQ80XC3 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC13.22□□□□□ -0.29
Usp6nlQ80XC3 AC166341.2-201ENSMUST00000220571 120 ntBASIC13.22□□□□□ -0.29
Usp6nlQ80XC3 Gm34809-203ENSMUST00000222945 509 ntTSL 5 BASIC13.22□□□□□ -0.29
Usp6nlQ80XC3 AC165260.2-203ENSMUST00000224237 336 ntBASIC13.22□□□□□ -0.29
Usp6nlQ80XC3 AC154257.1-202ENSMUST00000224729 843 ntBASIC13.22□□□□□ -0.29
Usp6nlQ80XC3 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Usp6nlQ80XC3 Nop10-201ENSMUST00000028553 1109 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Usp6nlQ80XC3 Tbca-201ENSMUST00000046644 559 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Usp6nlQ80XC3 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
Usp6nlQ80XC3 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Usp6nlQ80XC3 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Usp6nlQ80XC3 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Usp6nlQ80XC3 Gm5380-201ENSMUST00000119296 2136 ntBASIC13.22□□□□□ -0.29
Usp6nlQ80XC3 Gm2420-201ENSMUST00000119864 2149 ntBASIC13.22□□□□□ -0.29
Usp6nlQ80XC3 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Usp6nlQ80XC3 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
Usp6nlQ80XC3 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Usp6nlQ80XC3 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Usp6nlQ80XC3 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Usp6nlQ80XC3 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Usp6nlQ80XC3 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Usp6nlQ80XC3 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Usp6nlQ80XC3 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Usp6nlQ80XC3 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Usp6nlQ80XC3 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC13.21□□□□□ -0.29
Usp6nlQ80XC3 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Usp6nlQ80XC3 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC13.21□□□□□ -0.29
Usp6nlQ80XC3 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Usp6nlQ80XC3 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC13.21□□□□□ -0.29
Usp6nlQ80XC3 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Usp6nlQ80XC3 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Usp6nlQ80XC3 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Usp6nlQ80XC3 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Usp6nlQ80XC3 CT009489.1-201ENSMUST00000227740 1893 ntBASIC13.21□□□□□ -0.29
Usp6nlQ80XC3 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Usp6nlQ80XC3 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Usp6nlQ80XC3 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC13.21□□□□□ -0.29
Usp6nlQ80XC3 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Usp6nlQ80XC3 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Usp6nlQ80XC3 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC13.21□□□□□ -0.29
Usp6nlQ80XC3 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Usp6nlQ80XC3 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Usp6nlQ80XC3 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Usp6nlQ80XC3 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Usp6nlQ80XC3 Gm6189-201ENSMUST00000164487 2082 ntBASIC13.21□□□□□ -0.29
Usp6nlQ80XC3 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms