Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdh19Q80TF3 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdh19Q80TF3 Gm9072-201ENSMUST00000218390 1514 ntBASIC11.78□□□□□ -0.52
Pcdh19Q80TF3 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Pcdh19Q80TF3 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC11.78□□□□□ -0.52
Pcdh19Q80TF3 Gm14263-201ENSMUST00000117955 746 ntBASIC11.78□□□□□ -0.52
Pcdh19Q80TF3 Gm20426-201ENSMUST00000173657 440 ntBASIC11.78□□□□□ -0.52
Pcdh19Q80TF3 CT009764.1-201ENSMUST00000222260 483 ntBASIC11.78□□□□□ -0.52
Pcdh19Q80TF3 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdh19Q80TF3 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdh19Q80TF3 Ankrd31-203ENSMUST00000208758 5859 ntTSL 5 BASIC11.78□□□□□ -0.52
Pcdh19Q80TF3 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC11.78□□□□□ -0.52
Pcdh19Q80TF3 Gm44292-201ENSMUST00000205194 2364 ntBASIC11.78□□□□□ -0.52
Pcdh19Q80TF3 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdh19Q80TF3 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdh19Q80TF3 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdh19Q80TF3 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdh19Q80TF3 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdh19Q80TF3 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdh19Q80TF3 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Pcdh19Q80TF3 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdh19Q80TF3 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdh19Q80TF3 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdh19Q80TF3 Cad-211ENSMUST00000202795 6559 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Pcdh19Q80TF3 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC11.77□□□□□ -0.52
Pcdh19Q80TF3 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Pcdh19Q80TF3 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
Pcdh19Q80TF3 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Pcdh19Q80TF3 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Pcdh19Q80TF3 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Pcdh19Q80TF3 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdh19Q80TF3 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdh19Q80TF3 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC11.77□□□□□ -0.53
Pcdh19Q80TF3 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdh19Q80TF3 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdh19Q80TF3 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdh19Q80TF3 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Pcdh19Q80TF3 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdh19Q80TF3 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC11.77□□□□□ -0.53
Pcdh19Q80TF3 Gm11663-201ENSMUST00000117888 290 ntBASIC11.77□□□□□ -0.53
Pcdh19Q80TF3 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC11.77□□□□□ -0.53
Pcdh19Q80TF3 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC11.77□□□□□ -0.53
Pcdh19Q80TF3 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC11.77□□□□□ -0.53
Pcdh19Q80TF3 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdh19Q80TF3 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Pcdh19Q80TF3 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Pcdh19Q80TF3 Gm8546-201ENSMUST00000178288 1264 ntBASIC11.77□□□□□ -0.53
Pcdh19Q80TF3 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Pcdh19Q80TF3 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC11.77□□□□□ -0.53
Pcdh19Q80TF3 Ighv1-48-201ENSMUST00000191795 294 ntBASIC11.77□□□□□ -0.53
Pcdh19Q80TF3 Gm43947-201ENSMUST00000203019 959 ntBASIC11.77□□□□□ -0.53
Pcdh19Q80TF3 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC11.77□□□□□ -0.53
Pcdh19Q80TF3 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdh19Q80TF3 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC11.77□□□□□ -0.53
Pcdh19Q80TF3 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC11.77□□□□□ -0.53
Pcdh19Q80TF3 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdh19Q80TF3 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdh19Q80TF3 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdh19Q80TF3 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC11.77□□□□□ -0.53
Pcdh19Q80TF3 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdh19Q80TF3 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC11.77□□□□□ -0.53
Pcdh19Q80TF3 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
Pcdh19Q80TF3 Gm17435-202ENSMUST00000212699 1998 ntBASIC11.77□□□□□ -0.53
Pcdh19Q80TF3 AC125108.1-201ENSMUST00000218986 2330 ntBASIC11.77□□□□□ -0.53
Pcdh19Q80TF3 Adra1a-206ENSMUST00000225182 2337 ntBASIC11.77□□□□□ -0.53
Pcdh19Q80TF3 Ntrk2-204ENSMUST00000224259 3049 ntBASIC11.77□□□□□ -0.53
Pcdh19Q80TF3 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdh19Q80TF3 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdh19Q80TF3 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdh19Q80TF3 Gm44758-201ENSMUST00000206096 2068 ntBASIC11.77□□□□□ -0.53
Pcdh19Q80TF3 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdh19Q80TF3 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdh19Q80TF3 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Pcdh19Q80TF3 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdh19Q80TF3 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC11.77□□□□□ -0.53
Pcdh19Q80TF3 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdh19Q80TF3 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdh19Q80TF3 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdh19Q80TF3 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC11.76□□□□□ -0.53
Pcdh19Q80TF3 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdh19Q80TF3 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdh19Q80TF3 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC11.76□□□□□ -0.53
Pcdh19Q80TF3 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdh19Q80TF3 Gm37391-201ENSMUST00000194891 2318 ntBASIC11.76□□□□□ -0.53
Pcdh19Q80TF3 Gm5422-201ENSMUST00000050717 2721 ntBASIC11.76□□□□□ -0.53
Pcdh19Q80TF3 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdh19Q80TF3 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdh19Q80TF3 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdh19Q80TF3 Gm8038-201ENSMUST00000164674 2044 ntBASIC11.76□□□□□ -0.53
Pcdh19Q80TF3 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdh19Q80TF3 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdh19Q80TF3 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdh19Q80TF3 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdh19Q80TF3 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdh19Q80TF3 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC11.76□□□□□ -0.53
Pcdh19Q80TF3 Gm11509-201ENSMUST00000117358 325 ntBASIC11.76□□□□□ -0.53
Pcdh19Q80TF3 Gm7851-201ENSMUST00000117574 323 ntBASIC11.76□□□□□ -0.53
Pcdh19Q80TF3 Gm6335-201ENSMUST00000118081 1194 ntBASIC11.76□□□□□ -0.53
Pcdh19Q80TF3 Gm7816-201ENSMUST00000119884 1194 ntBASIC11.76□□□□□ -0.53
Pcdh19Q80TF3 Gm15432-201ENSMUST00000121106 195 ntBASIC11.76□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 74.1 ms